LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium1220g00002	ATGTCTGCATTCGACCCTTACGCACACCTTGGCTTCAGCAAGAACCCCGACGGCACCATCACACGTTTATTATCAAAATCACCAACCGTGGAGGCCAACCCTGAGCCTTCACCCGGAACCACCGTCGTTTCAAAAGATGTAACCATCAACGCCGAAAAGAAAACATGGGTCCGAATCTTTCGACCCACCAAGCTCCCTTCCAACGACAACACGGTGGCGCGTTTGCCCATCGTCATTTACTTCCACAACGGTGGCTTTGTGCTCTTCAGCCCTAACGGCATCGACAGCCATAAGAAGTGCTCGCACATCGCCGATGACGTCCCCTCCATCGTTGTCTCCGCCTCTTTTCGCCTTGCTCCGGAGCATCGTCTCCCGACACAGTACCAAGACGCATACGACGCCGTTTTGTGGGTGAAGAACCAATTAAACAACCCCAATGGAGAGAAATGGTTAAAAGATTATGGGGACCCTTCTAGATGCTACCTATATGGCTCTGATTGTGGTGCCAATATAGCTTTCAACGTTTCCATGCAGACTGCTGACACAGATTTGAGGCCATTAAGGATTCGTGGTTTGGTCCTGAACCAACCCATGTTCGGAGGGGAGAAGAGAACAGGATCAGAGCTGAAGTTTGCAGCAGATCAAGTATTACCTTTGCCAGTGTTGGACTTGTTGTGGAGTATGGCTTTGCCTAAAGGGACAGATCGTGACCATAGGTATTGCAACCCTATGGTGAAGGGACCACACCATGATAATGTTAAGAAGGTGGCGAAGTGTCTTGTTGTAGGGTTCAATGGCGACATCATGGTGGATCGACAACAAGAATTCGTGACCATGTTGGTCAAATGTGGGGTGCAAGTGGAAGCACGTTTTGACCAAGTGGGGTTCCATGATATTGACATGGTGGATCCTAATAGGGCTAGTGCTGTTGTAAATATTGCCAAGGACTTTATTCTTGGTTGA	963	0.4901	MSAFDPYAHLGFSKNPDGTITRLLSKSPTVEANPEPSPGTTVVSKDVTINAEKKTWVRIFRPTKLPSNDNTVARLPIVIYFHNGGFVLFSPNGIDSHKKCSHIADDVPSIVVSASFRLAPEHRLPTQYQDAYDAVLWVKNQLNNPNGEKWLKDYGDPSRCYLYGSDCGANIAFNVSMQTADTDLRPLRIRGLVLNQPMFGGEKRTGSELKFAADQVLPLPVLDLLWSMALPKGTDRDHRYCNPMVKGPHHDNVKKVAKCLVVGFNGDIMVDRQQEFVTMLVKCGVQVEARFDQVGFHDIDMVDPNRASAVVNIAKDFILG	320

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium1220g00002	320	SUPERFAMILY	alpha/beta-Hydrolases	21	306	IPR029058	-
	Vium1220g00002	320	PANTHER	ARYLACETAMIDE DEACETYLASE	27	298	-	-
	Vium1220g00002	320	Pfam	alpha/beta hydrolase fold	78	298	IPR013094	GO:0016787
	Vium1220g00002	320	Gene3D	alpha/beta hydrolase	7	319	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium1220g00002	Vium-Chr1220	56217	58387	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium1220g00002	42	276	Carbohydrate Esterase	AT1G68620	33.333	7.48e-40	141

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium1220g00002	-		-	gmx:100813863	520.005