Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12202g00001 ATGGATAAACTGTCTCATGTATATGCGGAATTGCGGAGGGAATCTTCTCACGGACAAGGAGTCCCTATCGCTGTAAGGCACATCGAATCCATGATACGGATGTCTGAAGCTCACGCTAGAATGCATCTCAGACAACATGTTACACAAGAGGATGTGGACATGGCAATTCGTGTTCTACTTGAATCATTCATTTCCACACAGAAGTTTGGGGTTCAGAAGGCTCTTCAAAAGAGCTTTAGAAAGTACATGACTTTCAAGAAGGACTATAATGAACTGCTGCTTTATATTCTCCGGGAGCTTGTAAAAAATGCTCTGCATTTCGAAGAAATTGTCACAGGGTCTACTTCAGGGCTAACTTATGTAGATGTTAAAGTAGATGATTTGTACAATAAGGCTCAAGAGCATGACATCTATGATCTCAAACCATTCTTCAATAGCAACCAGTTTTCAAGGGCCAATTTTGTGTTGGATGAAGAACGGAAAGTGATCAGGCATCGCCTTGTTTGA 507 0.4122 MDKLSHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAIRVLLESFISTQKFGVQKALQKSFRKYMTFKKDYNELLLYILRELVKNALHFEEIVTGSTSGLTYVDVKVDDLYNKAQEHDIYDLKPFFNSNQFSRANFVLDEERKVIRHRLV 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12202g00001 168 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 2 116 IPR031327 GO:0003677|GO:0005524|GO:0032508
Vium12202g00001 168 Gene3D - 1 86 IPR027417 -
Vium12202g00001 168 Pfam MCM AAA-lid domain 2 63 IPR041562 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12202g00001 3 164 Core DNA Replication Machinery Family AT1G44900 67.284 1.90e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12202g00001 K02540 - vum:124821191 333.183