Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12175g00001 ATGGCGGATGAAACACAAAATGAACTGAAGGAGGAGATTCCAGAAATTGTACCCTTTGACCCTACCAAAAAGAAGAAGAAAAAGAAAATTACAATTGTAGATCCTGCTGATGACCCCGTGGAGAAATTGGCTGAGAAGACGGAAAACCTCACAGTTTCTGATGGGGTTGAGGCTGCATTTACTGGTTTGAAAAAGAAAAAGAAGAAGCCTGTTGAAATGAGTAACTTGAATGATGAGAGCGGAGATGCAATTGAAGATTTGGATGATCATGCTGAAGAGGATGAAGGAGAAATGGTTGTTCCTCAGGCTCGTTATCCTTGGGAAGGGAGTGATCGTGATTATGAATACGAGGAGCTTCTTGGCAGAGTGTTTAACATTCTTCGGGAGAATAATCCTGAACTTGCTGGAGACAGGCGAAGGACAGTAATGAGGCCTCCTCAGGTTCTTCGTGAAGGCACAAAGAAAACTGTGTTTGTGAATTTTATGGATCTGTGCAAAACAATGCATCGGCAGCCTGACCATGTCATGGCTTTCTTGCTGGCTGAGTTGGGTACAAGTGGATCGCTTGACGGACAGCAGAGATTGGTTGTTAAGGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATGTCAATGAGTATGTCATTTGCCTTGGATGCAAGAGCCCAGATACCATACTTACGAAGGAGAATCGTCTCTTCTTTCTCCGGTGTGAAAAGTGTGGATCAGGACGATCGGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGAAGGAACACGGGAACATGA 807 0.4461 MADETQNELKEEIPEIVPFDPTKKKKKKKITIVDPADDPVEKLAEKTENLTVSDGVEAAFTGLKKKKKKPVEMSNLNDESGDAIEDLDDHAEEDEGEMVVPQARYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILTKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12175g00001 268 SMART eIF2Bneu4 138 247 IPR002735 GO:0003743|GO:0006413
Vium12175g00001 268 MobiDBLite consensus disorder prediction 1 22 - -
Vium12175g00001 268 Pfam Domain found in IF2B/IF5 137 246 IPR002735 GO:0003743|GO:0006413
Vium12175g00001 268 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 113 220 IPR016189 GO:0003743|GO:0006413
Vium12175g00001 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 117 267 IPR045196 GO:0003743|GO:0006413
Vium12175g00001 268 FunFam Eukaryotic translation initiation factor 2 subunit 111 253 - -
Vium12175g00001 268 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 217 252 IPR016190 GO:0003743|GO:0006413
Vium12175g00001 268 Gene3D - 111 253 - -
Vium12175g00001 268 MobiDBLite consensus disorder prediction 1 30 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12175g00001 1 266 Eukaryotic Initiation Factors Gene Family AT5G20920 77.695 6.32e-141 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12175g00001 K03238 - gmx:100775688 517.309