Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12170g00015 ATGGCTGATTTCATGACCTCTACTCATCGAGTGAAGTGGATTTTTACTCCTCAACAGCTGGTTGAGAAATATAAAGCAGCTAATCAGAGAGCCAAACACATTCTAGAGAAGTATGGTGCAACTCTAATGGTAGATGTTGATGGATCATTGTCATATCCTGAACCCCCGATGACTGCAAAAGACAGTGGTGAGAAGCATTCTCGGACAAAACCTCTTAGTATTGAAGAAGAACAATGCATACGGGTATTTTATGAAAACAAGCTACAAGAAGTATGTAACAACTTCCGCTTCCCTCATAAGATCCAGGCAACAGCCCTTATCTATTTTAAAAGATTCTATCTACAATGGTCGGTGATGGAACATCAACCAAAACATATTATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTGTCGGCTGAGGAGCTTGGTAAGGGGATCTCACAGGATCATCAAATGATTCTCATTAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTAATTGTGTATGCGCCATATCGCTCGGTTGAAGGTTTTATAATTGATATGGAGGGATTTTGCAATGGTGGTGATGATCAGCTTCAAATGCTTAAGACTTTGCAAGATACAGCAAGGTTGGAAGTTGATACAATGATGCTTCAGATGCAACACTTCTTTTATTTCCTCTGGTTGGCCTTGGCTGCTCTGGGTAACTCAAATGCACTGCACAATGTCATTGACTTTGATAGTTATCTTGAGAGCATTTTCAAGGTCAGAATTCCATGCACCAATGCCGAGCTTGCTGAATCACTGCATGCAATTGATTCCTGTGTTAAAAAGTACAAAATTCCTTCTGAGAAGGAATTGAAGCATATCAACCGAAAACTGAAGTCTTGTTGGGGTCATAGCTCTCATGACGAGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGTCCAAAAGGAGCTCAAATGAGGCACAAAATATGGCATCTCTTGCCTAG 999 0.4024 MADFMTSTHRVKWIFTPQQLVEKYKAANQRAKHILEKYGATLMEXDVDGSLSYPEPPMTAKDSGEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEGFCNGGDDQLQMLKTLQDTARLEVDTMMLQMQHFFYFLWLALAALGNSNALHNVIDFDSYLESIFKVRIPCTNAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSCWGHSSHDEGKKREKKSKHKSKRSSNEAQNMASLA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12170g00015 333 SUPERFAMILY Cyclin-like 179 303 IPR036915 -
Vium12170g00015 333 SMART cyclin_7 87 168 IPR013763 -
Vium12170g00015 333 MobiDBLite consensus disorder prediction 51 71 - -
Vium12170g00015 333 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Vium12170g00015 333 FunFam cyclin-H1-1 63 175 - -
Vium12170g00015 333 Gene3D - 63 175 - -
Vium12170g00015 333 PANTHER CYCLIN 66 321 IPR043198 GO:0006357|GO:0016538
Vium12170g00015 333 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Vium12170g00015 333 Gene3D - 177 280 - -
Vium12170g00015 333 MobiDBLite consensus disorder prediction 299 333 - -
Vium12170g00015 333 Pfam Cyclin, N-terminal domain 85 174 IPR006671 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12170g00015 1 278 Core Cell Cycle Gene Families AT5G27620 58.865 3.10e-109 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12170g00015 K06634 - gmx:100800023 531.176