Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1215g00002 ATGCTTATTTATTTACCATCTCTTCTGCAGATTGCTTTTACATCTGTGGTTTATCCATCTTTAATTCTTGCATATATGGGGCAAGCTGCTTATCTATCTAAACATCATGACATTGAGCAAGATTATCACTTTGGGTTTTACGTATCTGTACCAGAGAAATTGAGATGGCCTGTTCTGGTTATAGCCATACTAGCTGCAGTTGTTGGTAGTCAAGCCATTATCACTGGAACATTCTCAATCATCAAGCAGTGCTCTGCATTAAGTTGTTTCCCGAGAGTGAAAGTGATTCACACATCATCAAAAATTCATGGGCAAATATATATCCCTGAGGTCAATTGGATATTGATGATATTGTGCTTGGCAGTAACTGTTTGTTTCAGAGACACAAAGCGCCTGGGTAATGCCTCAGGTTTGGCAGTAATCACAGTGATGCTGGTGACCACCTGTTTGATGTCACTGGTTATTGTTCTATGCTGGCACCAAAATGTCCTCCTTGCACTTGGGTTTGTTTTCGTATTTGGCACCATTGAGGCTCTCTTCTTCTCTGCTTCTCTTATCAAGTTCCTGCAAGGAGCATGGGTGCCTATAGCGTTGGCTCTTGTATTTCTGACTTTCATGTATGTCTGGCACTACGGCACACTAAAAAAGTATGAATATGATGTTCAAAACAAGGTTTCCATCAACTGGCTTCTCGGCCTAGGTCCCAGCATAGGCATAGTCAGAGTGCGTGGGGTTGGCCTTATACACACCGAGCTAGTTTCTGGAATTCCAGTAATCTTCTCCCACTTTGTAACCAACCTCCCAGCCTTCCATGAAGTCCTAGTTTTCCTCTGCATCAAACACGTGCCAGTTCCACATGTTAGACCTGATGAACGGTTTCTGGTTGGCCGCGTTGGTCCAAAAGAGTTCAGACTCTACCGGTGCATAGTGCGATATGGATACCGTGATGTCCACAAAGATGATGTTGAGTTTGAGAATGATCTTTTGTGCAGCATAGCAGAGTTCATTCGCACAGAAAAAACCGGATTGAACTCTTCAAATGATGAGCCTGGAAAGGATGACAGAATGGCAGTTGTTGGAACTTGTTCTACTCATTCCCTTTTGATGAGTGAGGACAATGTAGAGAATGTTGAGAATGTAGAGAATGCAGGGCCATCAGAACTGAAGGAGATAAAGTCACCAAATGTTATAAAGCAGCAGAAGAAAAGGGTAAGGTTTTTGGTACCTGAGAGTCCAAAGATTAACACAGATGCAAAGAAAGAGTTGGAGGAGGTTATGGAAGCAAGGGAAGGTGGGGTAGCTTACATTATAGGACAGACACACTTGAGAGCAAAACCAGGGTCTAGCATGGTGAAAAAAATAGCCATTAATATAGTGTATGAATTCCTAAGAAGAAATAGCAGGTCACCCTCCTTTGTCACTGGTGTGCCTCATGCATCATCTCTTGAAGTTGGGATGATGTATCAAGTTTAA 1473 0.425 MLIYLPSLLQIAFTSVVYPSLILAYMGQAAYLSKHHDIEQDYHFGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVIHTSSKIHGQIYIPEVNWILMILCLAVTVCFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHQNVLLALGFVFVFGTIEALFFSASLIKFLQGAWVPIALALVFLTFMYVWHYGTLKKYEYDVQNKVSINWLLGLGPSIGIVRVRGVGLIHTELVSGIPVIFSHFVTNLPAFHEVLVFLCIKHVPVPHVRPDERFLVGRVGPKEFRLYRCIVRYGYRDVHKDDVEFENDLLCSIAEFIRTEKTGLNSSNDEPGKDDRMAVVGTCSTHSLLMSEDNVENVENVENAGPSELKEIKSPNVIKQQKKRVRFLVPESPKINTDAKKELEEVMEAREGGVAYIIGQTHLRAKPGSSMVKKIAINIVYEFLRRNSRSPSFVTGVPHASSLEVGMMYQV 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1215g00002 490 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 9 489 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium1215g00002 490 Pfam K+ potassium transporter 9 316 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1215g00002 Vium-Chr1215 17739 19693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1215g00002 9 490 Inorganic Solute Cotransporters AT1G70300 71.488 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1215g00002 K03549 - gmx:100793141 853.588