Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1215g00001 ATGGATCTAGAAGGTGGAACTCGTCGATATTCTGCTAAGAGAGAGTCGTGGAGAACGGTTCTGACTCTGGCGTACCAGAGTCTGGGTGTAGTGTACGGTGATTTGAGCATTTCGCCGTTGTACGTTTTCAGAAGCACGTTTGCGGAGGACATTAAGCACACAGAGAGCAACGACGAGGTTTTCGGCGTTTTGTCGCTGGTGTTTTGGACTATAACGCTGATTCCTTTGGTGAAGTACGTGTTTGTTGTGCTGAAAGCTGATGATAACGGCGAGGGAGGCACGTTCGCATTGTACTCGTTATTGTGCCGCCACGCGCGGGTGAGTTCGCTGCCGAATTGCCAGGTGGCGGACGAGGAGTTGTCGGAGTACAAAAAGGATTCGCGCGGCGCGGCTCCTGAGAGGAGCTTCGCGTTGCGGCTCAAAAGCACGTTTGAGAGGCACAGGGTTCTGCAGAGGGTTTTACTCGTTCTGGCTCTGATTGGGACTTGCATGGTCATTGGGGATGGCATCCTCACGCCGGCTATTTCTGTTTTCTCGGCTGTTTCTGGATTGGAGCTTTCAATGTCCAAGGAGACGCACGCATATGTTGAAGTTCCAGCTTCATGCATCATATTGATAGGGTTGTTTGCTCTTCAGCATTATGGCACGCACAGAGTTGGCTTCTTGTTTGCTCCTGTAATTATTGTGTGGCTTTTCTGCATTAGTACCATTGGAATATACAATATATTTCACTGGAATCCCCATGTATACAAAGCACTCTCTCCATATTATGCTTTCCAACTCTTGAGGAAAACTCAAAAGGGAGGTTGGATGGCCCTTGGTGGAATTTTACTGTGCATCACAGGAGCAGAAGCCATGTTTGCTGATCTTGGGCACTTTAGCCAATTATCAATCAAGATTGCTTTTACATCTGTGGTTTATCCATCTTTAATTCTTGCATATATGGGGCAAGCTGCTTATCTATCTAAACATCATGACATTGAGCAAGATTATCACTTTGGGTTTTACGTATCTGTACCAGAGAAATTGAGATGGCCTGTTCTGGTTATAGCCATACTAGCTGCAGTTGTTGGTAGTCAAGCCATTATCACTGGAACATTCTCAATCATCAAGCAGTGCTCTGCATTAAGTTGTTTCCCGAGAGTGAAAGTGATTCACACATCATCAAAAATTCATGGGCAAATATATATCCCTGAGGTCAATTGGTTATTGATGATATTGTGCTTGGCAGTAACTGTTTGTTTCAGAGACACAAAGCGCCTGGGTAATGCCTCAGGTTTGGCAGTAATCACAGTGATGCTGGTGACCACCTGTTTGATGTCACTGGTTATTGTTCTATGCTGGCACCAAAATGTCCTCCTTGCACTTGGGTTTGTTTTCGTATTTGGCACCATTGAGGCTCTCTTCTTCTCTGCTTCTCTTATCAAGTTCCTGCAAGGAGCATGGGTGCCTATAGCGTTGGCTCTTGTATTTCTGACTTTCATGTATGTCTGGCACTACGGCACACTAAAAAAGTATGAATATGATGTTCAAAACAAGGTTTCCATCAACTGGCTTCTCGGCCTAGGTCCCAGCATAGGCATAGTCAGAGTGCGTGGGGTTGGCCTTATACACACCGAGCTAGTTTCTGGAATTCCAGTAATCTTCTCCCACTTTGTAACCAACCTCCCAGCCTTCCATGAAGTCCTAGTTTTCCTCTGCATCAAACACGTGCCAGTTCCACATGTTAGACCTGATGAACGGTTTCTGGTTGGCCGCGTTGGTCCAAAAGAGTTCAGACTCTACCGGTGCATAGTGCGATATGGATACCGTGATGTCCACAAAGATGATGTTGAGTTTGAGAATGATCTTTTGTGCAGCATAGCAGAGTTCATTCGCACAGAAAAAACCGGATTGAGCTCTTCAAATGATGAGCCTGGAAAGGATGACAGAATGGCAGTTGTTGGAACTTGTTCTACTCATTCCCTTTTGATGAGTGAGGACAATGTAGAGAATGTTGAGAATGTAGAGAATGCAGGGCCATCAGAACTGAAGGAGATAAAGTCACCAAATGTTATAAAGCAGCAGAAGAAAAGGGTAAGGTTTTTGGTACCTGAGAGTCCAAAGATTAACACAGATGCAAAGAAAGAGTTGGAGGAGGTTATGGAAGCAAGGGAAGGTGGGGTAGCTTACATTATAGGACAGACACACTTGAGAGCAAAACCAGGGTCTAGCATGGTGAAAAAAATAGCCATTAATATAGTGTATGAATTCCTAAGAAGAAATAGCAGGTCACCCTCCTTTGTCACTGGTGTGCCTCATGCATCATCTCTTGAAGTTGGGATGATGTATCAAGTTTAA 2340 0.45 MDLEGGTRRYSAKRESWRTVLTLAYQSLGVVYGDLSISPLYVFRSTFAEDIKHTESNDEVFGVLSLVFWTITLIPLVKYVFVVLKADDNGEGGTFALYSLLCRHARVSSLPNCQVADEELSEYKKDSRGAAPERSFALRLKSTFERHRVLQRVLLVLALIGTCMVIGDGILTPAISVFSAVSGLELSMSKETHAYVEVPASCIILIGLFALQHYGTHRVGFLFAPVIIVWLFCISTIGIYNIFHWNPHVYKALSPYYAFQLLRKTQKGGWMALGGILLCITGAEAMFADLGHFSQLSIKIAFTSVVYPSLILAYMGQAAYLSKHHDIEQDYHFGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVIHTSSKIHGQIYIPEVNWLLMILCLAVTVCFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHQNVLLALGFVFVFGTIEALFFSASLIKFLQGAWVPIALALVFLTFMYVWHYGTLKKYEYDVQNKVSINWLLGLGPSIGIVRVRGVGLIHTELVSGIPVIFSHFVTNLPAFHEVLVFLCIKHVPVPHVRPDERFLVGRVGPKEFRLYRCIVRYGYRDVHKDDVEFENDLLCSIAEFIRTEKTGLSSSNDEPGKDDRMAVVGTCSTHSLLMSEDNVENVENVENAGPSELKEIKSPNVIKQQKKRVRFLVPESPKINTDAKKELEEVMEAREGGVAYIIGQTHLRAKPGSSMVKKIAINIVYEFLRRNSRSPSFVTGVPHASSLEVGMMYQV 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1215g00001 779 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 778 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium1215g00001 779 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium1215g00001 779 NCBIfam potassium uptake protein 23 779 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1215g00001 Vium-Chr1215 11705 16869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1215g00001 1 779 Inorganic Solute Cotransporters AT1G70300 74.202 0.0 1211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1215g00001 K03549 - gmx:100793141 1405.19