Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1212g00006 ATGAGAAAAATAATCATATGCTTATTGATCACTATCACAATAGGGTGTTACAAAGTTGGAGGAAGAGAAGTTATACTTCACAGAGTAGGAGGAGGAAGATATACTTGGTCACCAAAAACCAACTTTACACAATGGGCAAGTTATGAACACTTCTACAAGGGTGATTGGCTATATTTTGGTTTTGATAAGAGTCTCTACAATGTTTTGGAAGTGAACAAAACAAATTATGAGAATTGTATTGATACAAATTTCATACAAAATATCACAAAAGGAGGGAGAGATGTTGTTCAACTTTTAGAAGCAAGAACATATTATTTTCTTTGTGGAAGAGGTTTTTGCTTTGAGGGAATGAAAATAGCAATAAATGTTGAGGAACCCACTTTCAACCCATCACCCTCAGCACTATCCAATAAAGCCTTTCAGTCAAGTAGAATCATAAATATGGAATTCATTGTATTTTTGGTCACAGTTTTGGTAGTGGAGGTTTTTATTATATAA 498 0.3333 MRKIIICLLITITIGCYKVGGREVILHRVGGGRYTWSPKTNFTQWASYEHFYKGDWLYFGFDKSLYNVLEVNKTNYENCIDTNFIQNITKGGRDVVQLLEARTYYFLCGRGFCFEGMKIAINVEEPTFNPSPSALSNKAFQSSRIINMEFIVFLVTVLVVEVFII 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1212g00006 165 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Vium1212g00006 165 FunFam Lamin-like protein 23 126 - -
Vium1212g00006 165 PANTHER BLUE COPPER PROTEIN 27 131 IPR039391 GO:0009055
Vium1212g00006 165 ProSiteProfiles Phytocyanin domain profile. 25 125 IPR003245 GO:0009055
Vium1212g00006 165 Gene3D - 25 127 IPR008972 -
Vium1212g00006 165 Pfam Plastocyanin-like domain 36 116 IPR003245 GO:0009055
Vium1212g00006 165 SUPERFAMILY Cupredoxins 27 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1212g00006 Vium-Chr1212 61689 62535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1212g00006 23 165 Phytocyanin Superfamily AT2G27035 48.252 1.29e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1212g00006 - - vra:106770501 283.493