Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1207g00004 ATGGAGGAACATCTCACTCCACTGGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTCCCAATGGGTCTATGCAGTCTTCTGGAGGATCTTGCCAAGAAACTACCCTCCACCCAAGTGGGAAGGACAAGGGGCATATGATAGATCAAGAGGAAACAGAAGGAATTGGATACTGGTGTGGGAAGATGGTTTCTGCAATTTTGCTGCATCGGCAGCTCCTGAAATCAACTCTGGAGATTGTCCCACCTCGTCCGTTTATGGGAACTGTGAATTTCAGCCCTACCAAGGACTGCAACCGGAACTCTTCTTCAAGATGTCCCATGAGATCTACAACTATGGAGAAGGGTTAATAGGAAAAGTTGCTGCAGATCACAGCCACAAGTGGATATACAAAGAGCCTAATGATCAAGAAATCAACTTCTTGTCAGCATGGCACAATTCAGCAGATTCGCACCCTAGGACTTGGGAAGCCCAGTTCCTGTCTGGTATAAAGACCATAGCTCTTATTGCTGTGAGAGAAGGTGTTGTTCAATTAGGAGCTGTTCACAAGGTGATTGAAGACCTGAGCTATGTTGTTCTTCTAAGAAAAAAGTTCAGCTACATTGAGAGCATCCCTGGTGTGCTGTTGCCACATCCATCATCTTCTGCATACCCTTATAAAGTAGAAGGAGGGTATGGAGTTCCAGAACAATGGCATTTTCAAGGGAACCATCTTGCACCTCAAGCTGACTTATATGAGAACCACTTCAACTTGCCACTGAAGATAACTCCCTCGATGAGCAGCCTGGAAGCACTTCTGTCAAAGCTGCCCTCAGTGGTGCCACCACCACATCCGACACAACCACCACAGTCCCATCATCACCAACTTCTGGCATCACCCCAGCAAAGGCCACTGGAGTTCATGGGATCAATGCAGAAAGTGGCAAAAGAAGAGTTAGAAGAAGAAGTATACAGACCAGAACTTGACATTGGTGAGAGCAGCACTTCCATGTCAGGCTACCACCATCAACATCACTTCCATCAAGATCAGAATAATGTAACTAGGAGTGGAGCCAACGATGGATTTTGA 1089 0.461 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAPEINSGDCPTSSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGGYGVPEQWHFQGNHLAPQADLYENHFNLPLKITPSMSSLEALLSKLPSVVPPPHPTQPPQSHHHQLLASPQQRPLEFMGSMQKVAKEELEEEVYRPELDIGESSTSMSGYHHQHHFHQDQNNVTRSGANDGF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1207g00004 362 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 231 - -
Vium1207g00004 362 MobiDBLite consensus disorder prediction 278 298 - -
Vium1207g00004 362 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 205 IPR025610 -
Vium1207g00004 362 MobiDBLite consensus disorder prediction 331 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1207g00004 Vium-Chr1207 68647 70849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1207g00004 15 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.292 3.05e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1207g00004 - - vun:114173114 699.508