Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium12076g00001 ATGTCTTCAACATTGGATTCCGAAGCCACCGTAGTAGAAGAGTGTCGCGGTGTTCTTCACGTTTATAGCGACGGTTCCATAGTACGCTCTTCGCGCCCAAGCTTCAACGTCTCTGTAGTCGACGACGGCACCGTTTTGTGGAAAGATGTCGTTTTTCACCCTGCCCATGATCTTCAGCTTCGGCTCTACAAGCCAGCCGACTCAGCCGGCTCCAAGCTTCCCATCTTTTTCTACTTTCACGGTGGCGGCTTTTGCATCGGTTCACGCACTTGGCCTAATTGTCAAAACTACTGTTTTCGTCTTGCTTCCCAGCTTCGAGTTATAGTAGTAGCTCCAGATTACCGGCTGGCTCCCGAGAATCGACTCCCTGCCGCAATCGACGACGGCTTCGCGGCTTTTAAGTGGCTTCAGACTCAAGCCGCGAGTAATGAGCCGGACCCATGGTTGAGCAACGTGGCTGATTTTAGCCGGGTGTTCATCTCGGGTGACTCGGCTGGAGGGAACATAGCTCACCATTTGGCGGCTGGACTTGGATTCGGGTCGCCCAAGTTGGAGTCGGTTCGGGTGAGAGGTTATATTCTATTGGCACCTTTCTTTGGTGGAACTGTCCGAACGAAGTCAGAAGCTGAAGGACCAAAAGATGCTTTTCTGAATTTGGAACTTATTGATAGGTTTTGGAGGCTTTCTATTCCGATTGGGGAAACTACAGATCACCCTATTGTGAATCCATTTGGACCAAACAGCGAGAGCCTTGAAGGGAAAAGTCTAGAAGCAATTCTGGTGGTGGCCGGAGGAAGTGATTTGCTTAAAGAGAGAGCAGAGGATTATGCAAGGAGGCTTAAGGAGTGGGGTAAAGATATAGAGTATGTGGAATTTGAAGGACAGCAACATGGTTTCTTCACTATTGATCCCAACTCAGAACCCTCAAACAAGTTGATGTTCATCATCAAACATTTCATAGACAAGAATGTTTGA 975 0.4862 MSSTLDSEATVVEECRGVLHVYSDGSIVRSSRPSFNVSVVDDGTVLWKDVVFHPAHDLQLRLYKPADSAGSKLPIFFYFHGGGFCIGSRTWPNCQNYCFRLASQLRVIVVAPDYRLAPENRLPAAIDDGFAAFKWLQTQAASNEPDPWLSNVADFSRVFISGDSAGGNIAHHLAAGLGFGSPKLESVRVRGYILLAPFFGGTVRTKSEAEGPKDAFLNLELIDRFWRLSIPIGETTDHPIVNPFGPNSESLEGKSLEAILVVAGGSDLLKERAEDYARRLKEWGKDIEYVEFEGQQHGFFTIDPNSEPSNKLMFIIKHFIDKNV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium12076g00001 324 Gene3D alpha/beta hydrolase 14 321 IPR029058 -
Vium12076g00001 324 PANTHER ARYLACETAMIDE DEACETYLASE 15 304 - -
Vium12076g00001 324 SUPERFAMILY alpha/beta-Hydrolases 15 323 IPR029058 -
Vium12076g00001 324 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 158 170 IPR033140 -
Vium12076g00001 324 Pfam alpha/beta hydrolase fold 77 300 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium12076g00001 Vium-Chr12076 22 1297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium12076g00001 11 320 Carbohydrate Esterase AT5G16080 35.202 3.17e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium12076g00001 - - aprc:113858789 562.377