Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1201g00002 ATGGATGCGATGGAAGAGAGTGAGACAGGGAAAGGGAGTGTGAGCTTAGAGGGAGAGAAGGTGATATTGGTCCCTTACATGGAAGCCCATGTCCCCAAATATCACCAATGGATGAAGGACCCTTCTCTCCTTCAGGCCACTGCCTCCGATCCTCTTACCCTTCAGCAGGAGTACCAAATGCAGCTCTCATGGTTCCAAGACCCTTCCAAGGAGACCTTCATTGTACTGGACAAGGACTTGGTTGTTGGACAATTCTCGCACGGGGAACCCCACCTCGAAGCCATGGTTGGTGATGTAAATCTGTTCATGAATGATTTGGATGATCCTCACGTGGCAGAGGTTGAAATAATGATTGCAGAACCAAAGAGCCGTAGGAAGGGACTTGGGAAGGAGTCTGTTCTGATGATGATGACCTTTGCTATCGAGAAGTTAGGAATTAATATGTTTCTGACTAAAATTGCAGACTCAAATGGAGCATCCCTTGACATGTTCAAAAAATTGGTTTGGGTTTGTGCAAACTTCATATAG 528 0.4621 MDAMEESETGKGSVSLEGEKVILVPYMEAHVPKYHQWMKDPSLLQATASDPLTLQQEYQMQLSWFQDPSKETFIVLDKDLVVGQFSHGEPHLEAMVGDVNLFMNDLDDPHVAEVEIMIAEPKSRRKGLGKESVLMMMTFAIEKLGINMFLTKIADSNGASLDMFKKLVWVCANFI 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1201g00002 175 PANTHER N-ACETYLTRANSFERASE 9 12 169 IPR039135 GO:0008080
Vium1201g00002 175 Gene3D - 11 171 - -
Vium1201g00002 175 Pfam Acetyltransferase (GNAT) domain 21 167 IPR000182 GO:0016747
Vium1201g00002 175 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 15 167 IPR016181 -
Vium1201g00002 175 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 10 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1201g00002 Vium-Chr1201 29522 33217 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium1201g00002 Acetyltransf_3 1.1e-20 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1201g00002 K25762 - gmx:100817900 283.108