Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1196g00005 ATGGAGATAAGCTACGCATCGCCAAGTTTCTACGACCTCCCCGCCGCCGCTGCCGTTGCTTCAACCATGCCGTCCTCCGCGACCGGCGCACGTCCTGTAAGGATCATTCCTCTTCAGCATCCGACCGCCACCTCGTCCTCGTCTCCGCCGGCGAACGTCGCCTTCGCGCGGTGGACCGCGAAGCTCAGGCAGATGACGTGGCTCGAGTGGCTTGAGTTCTTCCTCCCTTGCCTACGCTGGATTCGCATCTATAAATGGCGCGAGTATTTCCAGGTCGATCTCATGGCCGGAATCACCGTCGGTGTCATGCTCGTTCCTCAGTCGATGTCGTATGCAAAATTGGCCGGACTTGAACCGATATATGGACTCTACTCTGGTTTTGTGCCTATATTTGTGTATGCCATATTCGGGTCTTCTCGCCAGCTTGCAGTAGGCCCAGTGGCATTGGTTTCCCTCTTGGTATCTAACGTGCTAAGTGGCATAGCTGACTCGTCCAGTGAATTATACACAGAGCTTGCAATATTACTGTCCCTTATGGTGGGGATAATGGAGTGTATAATGGGACTATTGAGGCTTGGATGGCTTATTCGTTTCATTAGCCATTCAGTGATTTCTGGCTTTACAACTTCTTCTGCTATTGTCATTGGTTTATCTCAAGCTAAGTATTTCTTGGGGTATGATGTAGACAGAAGTAGCAAGATCATTCCAGTAGTTAAGAGTATAATAGATGGAGCAGATAAGGTGTGTATTTCATTTGAAATTTGA 765 0.4928 MEISYASPSFYDLPAAAAVASTMPSSATGARPVRIIPLQHPTATSSSSPPANVAFARWTAKLRQMTWLEWLEFFLPCLRWIRIYKWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLEPIYGLYSGFVPIFVYAIFGSSRQLAVGPVALVSLLVSNVLSGIADSSSELYTELAILLSLMVGIMECIMGLLRLGWLIRFISHSVISGFTTSSAIVIGLSQAKYFLGYDVDRSSKIIPVVKSIIDGADKVCISFEI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1196g00005 254 PANTHER SULFATE TRANSPORTER 55 244 IPR001902 GO:0016020|GO:0055085
Vium1196g00005 254 ProSitePatterns SLC26A transporters signature. 119 140 IPR018045 GO:0008271|GO:0008272
Vium1196g00005 254 Pfam Sulfate permease family 90 248 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1196g00005 Vium-Chr1196 33897 35731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1196g00005 21 247 Inorganic Solute Cotransporters AT3G12520 72.294 7.21e-114 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1196g00005 K18059 - vum:124825321 475.322