Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11916g00003 ATGGCTATGAAAAACGTTAAAGATGAACAAGACCCGCACTTGGAGAGAATCTCCTCTGCAATCCGAGTCATACCTGATTTTCCCAAGCCAGGAATTTTGTTTCAGGACATAACCAGGCTGCTTCTTGATCCCAAGGCTTTCGAAGACACCATCGATCTTTTTGTTGAGAGAGGAAGAAGGAGGAGAAGGAAACTTACGCTGCGAATCAGAACGACCAACGTCCTCGCGCAGTCGTCGCCATCAAAGGAGTCGGAGTTGGAACCTTCGCGGAAGCGCGACCGCTATCAGACGCGACCTCGTCGCGCCTCACCACGTCTTCGCTGGCCACTCACCTCCATCACAGCGCTTTCGCTGCTCGTGGTCGCGAGAAATGAAGAAGAGAAAGGGAAGAAGCTTCAGCTAGCGTGTTCAAGGGAAAGAGGAGGAATTGAGGATCTGGGCCACTTGGAATCAGAAAGGGAAAAAAAGCTGAACCCTTAA 480 0.5083 MAMKNVKDEQDPHLERISSAIRVIPDFPKPGILFQDITRLLLDPKAFEDTIDLFVERGRRRRRKLTLRIRTTNVLAQSSPSKESELEPSRKRDRYQTRPRRASPRLRWPLTSITALSLLVVARNEEEKGKKLQLACSRERGGIEDLGHLESEREKKLNP 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11916g00003 159 SUPERFAMILY PRTase-like 19 61 IPR029057 -
Vium11916g00003 159 Gene3D - 3 102 IPR029057 -
Vium11916g00003 159 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 8 61 - -
Vium11916g00003 159 MobiDBLite consensus disorder prediction 73 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11916g00003 Vium-Chr11916 18692 19400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11916g00003 3 75 PRT Gene Family AT4G22570 54.795 1.08e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11916g00003 K00759 - qsu:112027152 86.6557