Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11856g00001 GTTGGCCTGATACTTGCAACCAGCTTCACTGAAGAATGGGCTCGGAAGAGTAGAGAGTTGTTCTTTTTTGACTCTCAGGCAAGTCTGGGAATGCTTTCAGTTTTTGGCTACATGCTTTTCCTGTTCTACACAGGGGTGAAAACAGACGTGAGTGTGATTCCCAGGACCAAAATATTAAGTGATCTCAAGATTCTGAATTCGGAGCTAGGTAGATTAAGCCAGTCCACAGCTTTGGTTACTGAGCTCTTCAATGTGGTCTTCACATCAAACCTTAGTATCTCCAAAATTTTGTCCAGTGATCCAGAAAAAGCCTGGTTTTGCCTCATAGTTTTCATTTTGTTTCTGCTAATTGTTATGTTCGTATATCGCCCAGCCATGTTTTGGATCATAAAACAGACCCCAGAGGGTTCTCCTGTTAGTGATCACTATGTGTATTTCATACTCATAATGGCTTTTATGGCTTCCTATATCACACATCGCATTGGATTTTTGGCTCTCTTTGGCCCTTTTGCATTGGGCATGGCTACCCCAGAAGGGCCTCCATTAGGCACTGCAGTTATAAAAAAGATTGACACTTTTGTTAACTGGATGTTCATGCCTCTCTTTGTGACCACATGTGTGATGAGGGTGGACCTCAGAGACTTCATGAAATGGAGAGACGAAGTGAGTGGAGGAATTGACCAGTTCATGTTGCAAGCCCTGATTATCATTGCAGTAACTAGCACTGTCAAATTTGTTGTATGCATGCTTCTTCCTTTGTACCACAACGTGCCCTTCAGTGACTCAGTTTCTCTCTCTTTGGTCTTGAATTGCAAGGGCGTAGTTGAATTGGCTGGATTCTCTATAATCAGAGATCTCATGGGCATGCCAGACAACGTGTTGGCATTGGTGATAGTGAGCATAATTCTGAGTGCTACAGTGGGGCCATTTCTTCTGGCATATCTCTACGACCCCATGAAGAAATATGCAGGAAACTACACCAAGCGAAACATCTTTGACCTCAAAAACAACTCCGAGCTTCGAGTTCTCACATGCATCCACAGACCCGACAACATTCCTCCGACCATCAACCTTCTCGAAGCCACCTTCCCCACCAAAGACAACCCTCTCTGTGTCTACGCCCTCCAGCTCATAGAACTCATCGGAAGAGCAGCTCCTGTCTTCATCTCTCACCAACTCCAATCAAAGAAAAAACACGACTCAAACGCTTCCATGGCAGACAAACTCATCGATGCGTTCCAAAACTTCGAGCACGAGTTCAAGGATGGCACTGGTGGTGAACACCTCACACCATCTCACCAACTGAGTTCATGTTGTTTCACCTCCCTCATTGTTCTTCCCTTTCATAAAAAGTGGTCTTCTGATGGCAACAGCATTGAGATAGAAGATGAGTCTCTGAGAGAGTTGAACTTCGTGTCATGCGGAGAGCTCCCTGGGAAAGATGATAGAGAAGCACTTTACTTTGCTAAGAGGATGACTAAGAATCCGCATGTCAGACTCACTGTGGTCAGGTTTTTGGCTAGGAATAATTATTCGGAGGTAACGGATTTGCAGGAACTGCTTGACACTGAGATTCTGAATGATATCAGGATTAACGGGAAGGTGGGTGAGACTAATGTGAATTACATAGAGAAGATTGTGCAGGATGGACCTGAGACGGCTTTGGTGATTCGGAAGTTGGGGAAGGAGTATGATTTGATCATTGTTGGAAGACAAGCTGGGATTGAAACTCCTCAAACATCTGGGTTGTTGCAGTGGAGTGAGTATCCAGAACTTGGGGTGCTTGGAGATTTTGTGGCTTCAACTGATGCTGCTGGCAAGGCTACTGTGTTTGTGATGCAGCAACAAAGAAGAGAAAGTGATGCTTAA 1869 0.4468 VGLILATSFTEEWARKSRELFFFDSQASLGMLSVFGYMLFLFYTGVKTDVSVIPRTKILSDLKILNSELGRLSQSTALVTELFNVVFTSNLSISKILSSDPEKAWFCLIVFILFLLIVMFVYRPAMFWIIKQTPEGSPVSDHYVYFILIMAFMASYITHRIGFLALFGPFALGMATPEGPPLGTAVIKKIDTFVNWMFMPLFVTTCVMRVDLRDFMKWRDEVSGGIDQFMLQALIIIAVTSTVKFVVCMLLPLYHNVPFSDSVSLSLVLNCKGVVELAGFSIIRDLMGMPDNVLALVIVSIILSATVGPFLLAYLYDPMKKYAGNYTKRNIFDLKNNSELRVLTCIHRPDNIPPTINLLEATFPTKDNPLCVYALQLIELIGRAAPVFISHQLQSKKKHDSNASMADKLIDAFQNFEHEFKDGTGGEHLTPSHQLSSCCFTSLIVLPFHKKWSSDGNSIEIEDESLRELNFVSCGELPGKDDREALYFAKRMTKNPHVRLTVVRFLARNNYSEVTDLQELLDTEILNDIRINGKVGETNVNYIEKIVQDGPETALVIRKLGKEYDLIIVGRQAGIETPQTSGLLQWSEYPELGVLGDFVASTDAAGKATVFVMQQQRRESDA 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11856g00001 622 Gene3D - 55 324 IPR038770 -
Vium11856g00001 622 PANTHER CATION/H + ANTIPORTER 57 470 - -
Vium11856g00001 622 Pfam Sodium/hydrogen exchanger family 37 312 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11856g00001 Vium-Chr11856 1626 4055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11856g00001 57 617 Antiporter Super Family AT5G22900 33.175 5.45e-113 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11856g00001 K26731 - gmx:100785558 800.816