Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11828g00001 ATGAGTTTTAGGCGTGAGATTGTTGGAGAAGTAACGGAAGTGGGAAGCAAAGTAGAAAAGTTTAAGATTGGAGACAAGGTGGCAGTGGGATGTTTGGTTGGGTCTTGTTCCTCATGCAAAAATTGTGTCAACAATCTTGAGAATTACTGCCAACAAGCGATTCCCTCATATGGTGCCAAGTATGTGGATGGTAGCATCACATATGGGGGTTTCTCTGACTTCATGGTTGTAGATGAGCACTTTGTTGTCAACATTCCAAATGGCCTACCTCTTGATGTTGCTGCACCTCTCCTTTGCGCAGGGATCACAGTGTATGGACCTTTGAGATATTTTGGCCTTGACAAACCTGGTATGCACCTCGGAGTGGTTGGCCTTGGTGGATTAGGCCATCTGGCTGTGAAGTTTGCAAAAGCCCTTGGCATGAAAGTTACTGTCATTAGTACCTCTCCTAGTAAGGAACAAGAAGCCATTCAACATCTTGGAGCAGATTACTTTGTGCTAAGTAGAGACCAAGATCAAATGAAGGCTGCAAATTGTACCTTGGATGGTATAATCGACACTGTTTTTGCGGTTCATCCTCTAATGCCTTTGATTGATCTTTTGAAGTCTCATGGAAAGCTAGTGACG 627 0.4386 MSFRREIVGEVTEVGSKVEKFKIGDKVAVGCLVGSCSSCKNCVNNLENYCQQAIPSYGAKYVDGSITYGGFSDFMVVDEHFVVNIPNGLPLDVAAPLLCAGITVYGPLRYFGLDKPGMHLGVVGLGGLGHLAVKFAKALGMKVTVISTSPSKEQEAIQHLGADYFVLSRDQDQMKAANCTLDGIIDTVFAVHPLMPLIDLLKSHGKLVT 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11828g00001 209 PANTHER ALDEHYDE REDUCTASE 5 208 IPR047109 GO:0016616
Vium11828g00001 209 Pfam Zinc-binding dehydrogenase 127 209 IPR013149 -
Vium11828g00001 209 Gene3D - 100 208 - -
Vium11828g00001 209 SUPERFAMILY GroES-like 6 117 IPR011032 -
Vium11828g00001 209 FunFam Cinnamyl alcohol dehydrogenase 100 209 - -
Vium11828g00001 209 Pfam Alcohol dehydrogenase GroES-like domain 6 84 IPR013154 -
Vium11828g00001 209 Gene3D - 5 99 - -
Vium11828g00001 209 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 89 208 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11828g00001 Vium-Chr11828 334 1178 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11828g00001 6 208 Monolignol Biosynthesis Gene Families AT4G37990 66.995 6.56e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11828g00001 K23232 - vum:124820933 421.009