Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11728g00012 ATGAACGACGCAGATGTCTCTAGGCAAATCCAGCAGATGGTGCGGTTCATCCGCCAGGAAGCGGAGGAAAAAGCCAATGAGATCTCTGTCTCCGCCGAGGAGGAATTCAATATCGAGAAGCTGCAGTTGGTTGAAGCCGAAAAGAAGAAGATCAGGCAAGAGTACGAACGCAAAGAGCGCCAAGTCGAAATTCGGAAGAAGATCGAGTATTCAATGCAGCTGAATGCTTCTCGAATTAAAGTTCTTCAAGCTCAAGATGACGTCATCAGTTCCATGAAAGAAGCTGCTTCCAAGGAACTTTTGAGTGCGAGTCATCATGATCATGTGTACAAAAACCTTCTGAAAGATCTCATTGTTCAGTGTTTGCTAAGACTGAAAGAAACTTCTGTCTTGTTGAGATGTCGGAAAGAGGACCTGCACTTGGTAGAGCATGTGCTGGATTCTGCTGCACAGGAGTATGGTGATAAAGCAAATGTTGAACCCCCAGAGATCATTGTTGACAACCAAGTCTATCTTCCACCTGGACCCATTCATCACAATGATCATGATATCTACTGTTCTGGTGGGGTGGTGCTGGCTTCTCGTGATGGAAAGATTGTGTGTGAAAACACTCTTGATGCACGACTTGATGTAGTGTTCCGTAAAAAGCTCCCTGAGATTCGAAAGCAGCTCTTTGGACAAGTTGTTGCTTGA 693 0.4517 MNDADVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKERQVEIRKKIEYSMQLNASRIKVLQAQDDVISSMKEAASKELLSASHHDHVYKNLLKDLIVQCLLRLKETSVLLRCRKEDLHLVEHVLDSAAQEYGDKANVEPPEIIVDNQVYLPPGPIHHNDHDIYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVVA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11728g00012 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vium11728g00012 230 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Vium11728g00012 230 Coils Coil 38 61 - -
Vium11728g00012 230 Gene3D - 1 62 - -
Vium11728g00012 230 Gene3D - 92 228 IPR038495 -
Vium11728g00012 230 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vium11728g00012 230 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11728g00012 Vium-Chr11728 82322 86582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11728g00012 1 230 Primary Pumps ATPases(2) AT4G11150 75.652 6.92e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11728g00012 K02150 - gmx:111064655 419.083