Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11728g00009 ATGAACACAAACAGAGCCGAAGCCGAACGCTTGCTCGCCATCGGTGAGAAGCTGCTCGAGAGCCGTGACCTGAGCGGCTCCCGCGACTTCGCCATTCTCGCGCAGGAAGCCGAGCCGCTCCTCGAAGGCTCCGACCAGATCCTCGCCATCGTCGACGTCCTCGTCGCCGCCGAGAAGCCGATCCACAACAGCCAACTCGATTGGTACGCCATTCTCCAAGTGGATCGCACGTGCCAGAACCTCGATCTCATCAGAAAACAGTACCGCAGACTCGGTCTTCTCCTTCACCCTGACAAGAACCCTTTCTCCCTCGCCGACCACGCTTTCAAGCTTGTCACCGATGCATGGGCCGTTTTATCCGACCCGGTTCAGAAAGCCTTGTACGACGGAGAGGTCGCCGGTTCGGTCGAAACGGCGAGTTTCTGGACCGCATGTCCGTACTGTTACTTTCTCTTCGAGTACCCTGCGGATTGCGAGGGGTGTTGCCTGAGGTGCCAGAATTGCGAGAGGTCGTTCCACGGGCTTTCGATTCCGTCGCTCCCTCCGCTCGTGCCGGGCCAGGAGGCCTATTATTGTAACTGGGGGTGCTTGCCCATGGGCTTTGTGTTTGGAACTTTGGGCTCCAATGGGCCTGGGTCTGTGCCTGAGAATGGCCCGAATGCTGTTTCGAATGGGGCTGCTTCGGAGTTGGGTTCTCTTTCTGCGCGGAAGCAGGGAAGGCCTCAAAAGGGGGTGTGA 738 0.5881 MNTNRAEAERLLAIGEKLLESRDLSGSRDFAILAQEAEPLLEGSDQILAIVDVLVAAEKPIHNSQLDWYAILQVDRTCQNLDLIRKQYRRLGLLLHPDKNPFSLADHAFKLVTDAWAVLSDPVQKALYDGEVAGSVETASFWTACPYCYFLFEYPADCEGCCLRCQNCERSFHGLSIPSLPPLVPGQEAYYCNWGCLPMGFVFGTLGSNGPGSVPENGPNAVSNGAASELGSLSARKQGRPQKGV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11728g00009 245 MobiDBLite consensus disorder prediction 214 245 - -
Vium11728g00009 245 SUPERFAMILY Chaperone J-domain 61 130 IPR036869 -
Vium11728g00009 245 SMART dnaj_3 66 124 IPR001623 -
Vium11728g00009 245 Pfam DnaJ domain 67 129 IPR001623 -
Vium11728g00009 245 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Vium11728g00009 245 Gene3D DnaJ domain 55 143 IPR036869 -
Vium11728g00009 245 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 210 - -
Vium11728g00009 245 PRINTS DnaJ domain signature 104 124 IPR001623 -
Vium11728g00009 245 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vium11728g00009 245 PRINTS DnaJ domain signature 88 103 IPR001623 -
Vium11728g00009 245 CDD DnaJ 67 121 IPR001623 -
Vium11728g00009 245 MobiDBLite consensus disorder prediction 214 231 - -
Vium11728g00009 245 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11728g00009 Vium-Chr11728 60752 61888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11728g00009 2 207 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 56.332 9.21e-86 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11728g00009 - - gmx:100802055 426.017