Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1169g00001 ATGGTAATGGCTGTGGCTAGTGGTGACTTGCTGGGTGAGAAAGCTTCGGCGATGAGAGCGTCTCTGGAGAGAAGCCAGACCATCACGGACGACGTCGTTTCGATTCTGGGCTCCTTCGACCACCGCCTTTCCGCCCTGGAAACCGCCATGCGACCTACCCAGATCAGAACACATTCTATTCGGAAAGCTCACGAGAACATTGATAGGACTTTGAAGACTGCAGAGGCCATATTGGTCCACTTTGATCAATATTATCAGGCAGAAGCAAAAATAATTAAAGGACCACATGAAGATGTGAAGAGCTATCTTGAAGCAATTGATCAGCTGAGACGAAACATTAGATTTTTTAACAATAAAAAGGGTTTTAAGAATGATGATGGTATTGCCATCCGTGCCAATAATTTGATAGCCGAAGCTATTTCTAAGCTAGAAGAAGAGTTCGAGCGGCTATTATCATCTTACAGCAAACCTGTGGAGCCTGAACGCCTCTTTAGTTCTCTTCCAAACACAATGCGACCTTCATCAGCATCACCAGGTCATGATGATGATTCCAGCAGCAAGAATCATTCTTCTTATATCCATTCTGAGCCACATAAAAATAATGCTGATACTGTTGTATACACACCTCCTGTTCTTATACCACCAAGAATATTGCCGTTGCTCAATAATTTAACAGAGCAAATGGTTCAAGCTGGTCACCAACAACAGTTGCTCAAAATATACAGAGATACCCGTTCTAAAGTATTAGAAGAAAGCCTACAAAAGCTTGGAGTTGAGAAGCTCAACAAAGATGATGTTCAAAAGCTACAATGGGAGGTTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATTGCTGTCAAATTGTTGTTTGCTGCTGAACGGAAAGTCTGTGATCAGATATTTGAAGGATTTGATTCGCTTAGTGATCAGTGTTTTGCTGAAGTAACTACAAACAGTATTTCCATGCTGCTTAGTTTTGGAGAAGCTATTGCCAAAAGCAAGAGATCACCTGAGAAGTTATTTGTGCTTTTGGACATGTATGAAATATTGCAAGAAATCCATTCAGAGATTGAAATACTCTTTAAAGGAAGAGCTTGCTCCAAAATAAGAGAAGCTGTACTGGGTTTGACAAAACAGCTTGCACGAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAAAAAGATGCTACAAAGACTGCAGTAACTGATGGAACTGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTATCGATCTACCTTAAACCAACTTTTCCAAGGGATTGAAGGTGAAAGTGATTCTTCACAGCTAGCTTCTGTGACCATGAGAATATTGCAAGCTCTTCAAACCAATTTAGATGGGAAATCTAAGCAATATAGAGACCCTGCTTTGACACACCTATTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTCGAAGGTCTGAAGCGAAGGATTTGATGGGGGATGATTGGATACAACGACATAGGAAAATTGTGCAACAGCATGCTAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAATCCCTCTCAATTCAGGGCCTCATCTCATCAAGTGGTGGGGGTAGTACTGCTGGTGGTGATGGGGGCAGTAGTGGTGCTTCAAGAGCAGTTGTTAAAGAAAGGTTTAAGGCATTCAATACTATGTTTGAGGAACTCCATCAGAAACAATCTCAGTGGACAGTACCAGACACAGAGTTGCGAGAATCTCTCATTCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTTGTGAAACGTTTCGGGCCTCTGGTGGAGAATGTGAAGAGCAGTCAGAGGTACATCAAATACAGTGCTGAAGATCTAGAGCGAATCCTAGGTGAATTTTTTGAAGGAAAAAACATGAATGATTCCAAGCGGTAA 1956 0.411 MVMAVASGDLLGEKASAMRASLERSQTITDDVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKTAEAILVHFDQYYQAEAKIIKGPHEDVKSYLEAIDQLRRNIRFFNNKKGFKNDDGIAIRANNLIAEAISKLEEEFERLLSSYSKPVEPERLFSSLPNTMRPSSASPGHDDDSSSKNHSSYIHSEPHKNNADTVVYTPPVLIPPRILPLLNNLTEQMVQAGHQQQLLKIYRDTRSKVLEESLQKLGVEKLNKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFAAERKVCDQIFEGFDSLSDQCFAEVTTNSISMLLSFGEAIAKSKRSPEKLFVLLDMYEILQEIHSEIEILFKGRACSKIREAVLGLTKQLARTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLNQLFQGIEGESDSSQLASVTMRILQALQTNLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLMGDDWIQRHRKIVQQHANQYKRNAWAKILQSLSIQGLISSSGGGSTAGGDGGSSGASRAVVKERFKAFNTMFEELHQKQSQWTVPDTELRESLILAVAEVLLPAYRSFVKRFGPLVENVKSSQRYIKYSAEDLERILGEFFEGKNMNDSKR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1169g00001 651 Coils Coil 99 119 - -
Vium1169g00001 651 MobiDBLite consensus disorder prediction 182 196 - -
Vium1169g00001 651 SUPERFAMILY Cullin repeat-like 77 642 IPR016159 -
Vium1169g00001 651 MobiDBLite consensus disorder prediction 167 181 - -
Vium1169g00001 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 643 IPR004140 GO:0000145|GO:0006887
Vium1169g00001 651 MobiDBLite consensus disorder prediction 162 202 - -
Vium1169g00001 651 Pfam Exo70 exocyst complex subunit 280 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium1169g00001 651 Gene3D Exocyst complex component Exo70 75 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1169g00001 Vium-Chr1169 18448 47537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1169g00001 3 651 EXO70 exocyst subunit family AT5G03540 69.719 0.0 940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1169g00001 K07195 - gmx:100775958 1117.83