Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11693g00002 ATGAGACCACGCAAGGATAGTGAGAGGCGCAGATTCGCTTCGGAATCGCGAAACTCAGCAGCAGGCTCCGAATCGCCGCGTCGAAGGCCGCGACTGTTCGCTCTGATGGCGGGGCAATCACGGAAATGGATGATCTTAGTTGCAACGATTTGGATTCAGGCCTTCACCGGCACTAATTTCGATTTCTCACAGTACTCCTCGTCGCTCAAATCCGCGCTCAACATCTCGCAGGTGCAATTGAACTACCTCGCCACCGCCAACGACATGGGGAAGGTTTTCGGCTGGTCATCTGGCATCGCGCTCATGTACCTTCCCCTATCGGTCGTCTTGTTCATCGCTGCTACCATGGGATTCTTCGGCTACGGCCTCCAGTGGCTCCTCCTTACCGGAGTGGTCGATTTGCCTTATTTTATGGTCTTTCTTTTGTGCCTTTTAGGTGGCTGTAGCATCTGTTGGTTCAACACAGTATGTTTTGTTCTTTGCATTAGGAATTTCCCAGTTAACCGAGCTCTTGCCCTATCGCTCACTGTGAGTTTCAAAGGCGTCAGTGCAGCACTATATACCCTTGCTGCCAATTCTATTGACCCTTCCTCCAGTGCACTCTATCTGCTTTTGAATGCTCTTGTTCCCCTTCTTATTTGTATAGCAGCACTTGTTCCTATTCTTCGCCAACCGACTTTAGACCCTCTCCCTCCTGATGCAGTAAACCGGGACTCAGTTATATTTCTAATATTGAACATCCTAGCCCTTTTAACTGGTCTTTATCTTCTCCTGTTTGGCTCTTCCACTTCTGGTGTGGCTTCTGCTCGGTTATGTTTTGGTGGAGCTATTCTCCTCCTCATCTTCCCATTTTGTATTCCAGGCATAGTATATGCTCGGGCATGGTTTCGGAATACCATCCATTCCAGCTTTCGGATGGAAAGCTCCAGCTTCATTCTTGTTCATGATGATGATCTTGAGATGCATAAAGAACTCCATAGCCGTCACAGTAGTCTTGTTAGCAATGGAGACACTTACAACCTGCTAAGTGACAATGGATACATGTATGGCAGTCAGAACGCAAAAGAGAATGATGTATGTTGCGAGAGGGTAATTGGCCAGGATCAATTAGCAATGCTAGGAGAAGAGCACCCAGCTGCAGTAATTGTTCGAAGATTGGATTTTTGGCTATACTATATTACATACTTCTGTGGAGGTACACTTGGTCTAGTCTATAGCAATAATCTTGGACAGATTGCTCAATCTCTAGGCCAGAGCTCAAATACTTCTACGCTTGTCACGCTCTATGCATCTTTTTCCTTTTTTGGACGCTTGCTTTCAGCTGGACCAGACTATATTCGGAATAAGCTCTACTTTGCAAGGACTGGTTGGCTTTCACTTGCACTTATACCAACCCCAGTTGCGTTCTTCCTCCTTGCTGCATCAGACAGTCTTCTGGTACTGCAGACAGGCACCGCACTGATTGGATTGAGCTCTGGTTTTATATTCGCAGCTGCCGTGTCAGTTACGTCTGAGCTGTTTGGACCTAATAGTGTGGGTGTCAACCACAACATCCTCATAACAAATATACCTATTGGCTCTCTTCTCTATGGCTTTCTCGCTGCACTAGTTTATGATGCTAATGCACACACAATACCAGGAAACTTGATAATGTCTGACAAAGTAGTGTGCATGGGAAGGGAGTGCTACTTCTGGACATTTGTCTGGTGGGGATGCATATCTGTCCTTGGACTAGCATCAAGCATCCTATTATTCTTAAGAACCAAGCATGCATATGAACATTTTGAGAAACACCGTATATCAACACAATCAGTTGTGTCTTAA 1824 0.4605 MRPRKDSERRRFASESRNSAAGSESPRRRPRLFALMAGQSRKWMILVATIWIQAFTGTNFDFSQYSSSLKSALNISQVQLNYLATANDMGKVFGWSSGIALMYLPLSVVLFIAATMGFFGYGLQWLLLTGVVDLPYFMVFLLCLLGGCSICWFNTVCFVLCIRNFPVNRALALSLTVSFKGVSAALYTLAANSIDPSSSALYLLLNALVPLLICIAALVPILRQPTLDPLPPDAVNRDSVIFLILNILALLTGLYLLLFGSSTSGVASARLCFGGAILLLIFPFCIPGIVYARAWFRNTIHSSFRMESSSFILVHDDDLEMHKELHSRHSSLVSNGDTYNLLSDNGYMYGSQNAKENDVCCERVIGQDQLAMLGEEHPAAVIVRRLDFWLYYITYFCGGTLGLVYSNNLGQIAQSLGQSSNTSTLVTLYASFSFFGRLLSAGPDYIRNKLYFARTGWLSLALIPTPVAFFLLAASDSLLVLQTGTALIGLSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDANAHTIPGNLIMSDKVVCMGRECYFWTFVWWGCISVLGLASSILLFLRTKHAYEHFEKHRISTQSVVS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11693g00002 607 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 43 593 - -
Vium11693g00002 607 MobiDBLite consensus disorder prediction 1 15 - -
Vium11693g00002 607 SUPERFAMILY MFS general substrate transporter 272 590 IPR036259 -
Vium11693g00002 607 Gene3D MFS general substrate transporter like domains 383 598 IPR036259 -
Vium11693g00002 607 Pfam Nodulin-like 42 287 IPR010658 -
Vium11693g00002 607 SUPERFAMILY MFS general substrate transporter 17 223 IPR036259 -
Vium11693g00002 607 Gene3D MFS general substrate transporter like domains 3 220 IPR036259 -
Vium11693g00002 607 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11693g00002 Vium-Chr11693 5705 11214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11693g00002 1 604 Nodulin-like Gene Family AT1G31470 57.541 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11693g00002 - - gmx:100803546 1025.39