Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11689g00004 ATGGAGAACAAGGAGAATCTTGAAGCAGCCAGAAAGTGTTTGACAACTAGTTTGGAAACATCAAGCGCCATTGCCTCTGCACTAGATGAATCTGGGTCGAGATTGGAGCTACTTAAACAGAGATATCTGGCTTTGCAAGCTTCCCTTAGACCCATCTCAATGCAAAAGTGCTCATTTGTCAACATTGAGCACGGTATAGACAGTGTTCTATGTTCTGCTGCTGCACTCCTTAAGGTTCTTGACTCTGTTCATCGGTTGGAGCAATCTCTCTTAACAGATCCCTCTTCTGATCTACACACATATGTCTCAGATACAAAGAAGCTTGAGGAAGCACTGAAGCTTCTTAGTGACAATTGCAGGTTGACAGTTGGCTGGCTGAAAGACATTTATGAGCTCTTTCAAGACAAAGCAATAACCAATGAGCTTTGCTTGTTGAAGGTGAAGAAATATCTCAGAATATTGCAAGAATTGCAGGTCAAGGAGGAAGGTGCTCGTCTTGATGAAGGCCTTCTTAGTACTGCTTTTGACAAACTAGAGCTCGAGTTCCACAGGCTTCTGACAGCAAACTCCGTGCCTCTTCCTTTGGTTTCATTGACATCACCACACACTGGCCAGAAAACCAGTATTACCAAACATATTTTGCCATTGACAAGTTCTTTGGCAGGGAAGTTGCATTCCATCACACAGAGATTAAATGCTAATGGCAGGCTACACAAGTGTCAATCCATATATGTTGAAGTTCGAGGCATGAATGCTCGGAGAAGTTTGAAGACTTTAGATTTGAGTTACTTGGATATTCCAACAACTGAAATTGAGGCTGTCCAGTCTATAGAGAGTTACATAGACCAATGGGGCTACCATTTGGAGTTGTTTGCTAAGCAACTGCTTGAGATTGAGTGGAGGTTTTCTGCTATTGTCTTTGAGAAAATTGGTCCAGAAGCATGCATGGGGTGTTTTGCAAAGATTGCCATTGAATCAGGAATTTTTTCTTTTATTCGATTTGGAAGGATGGTTACTGAGAGGAAAAATGACCCCTTCAAATTGTTGAACCTGCTGTCGATATTCAGGGTCTTAAATGATCTGAGGCTAAAATTCAACCAACTTTTCAGTGCGAAAGCATGTAAAGAAATTAGAACTGTGATAGAGGATCTTATAAAAAAAGTTGTCAATGGTGCCAATGAGATATTCTGGCAACTTCCAGCACAAGTGAAGTTGCAAAGGCCAACTTCTCCTCCCCCAGATGGCAGCGTTCCCAGGCTGGTGAGCTTTGTGACGGATTACTGCAATCAACTGCTTGGGGATGCTTATAGGCCACATTTGACACAAGTTGTGAGAATACATCTTAGTTGGAGAAAGGAAGCCTACGAAGAGGGTATCGTTTTGTGCCAAATGTATAACGCAATTAAGGAGGTTGCGGTTAATTTGGATGCTTGGTCGAAGACCTATGAAGATATCACCCTGTCCTACCTTTTTATGATGAATAATCACTGTCATTTCTGCAATTTGAGGGGTACTGTACTTGGAAATATGATGGGGGATTCTTGGTTAAGAGCACACGAACAATATAGGGACTATTATGCAGCACTTTATTTGAGGAACAGTTGGGGAAAGCTTCTGTCTATTCTTGTAGTACAAAAAGACATACTTTCACCCTCCAGTGCAAGTGTGACATGCCAAGACTTGGCAAAGAGACTAACTGCTTTTAATCTAGCTTTTGAGGAAGGATACAAGAAGCAATCTGATTGGGTAATCTCCGATGAGATCCTACGGGAAAATGTATGCAAGCATTTGACCAAAGGTATTATACCAATCTACAGGGCCTATGTCAAAAACTATTGTTTGACAACTGAAAATGATGCTAAGGTTGACAAACTTATGAAATACTCAGCAGAGAGTTTGGAGAACAAGATTACGTCTCTGTTTCAGACCAAGCAGAGGAAGGGTAGTAGCATTAAACAGGCAGACTTAATTAGTAAAATAAAATATCTCAGTCATCAATTTCGCTCAACTCTAGCAGCTATATGA 2025 0.4114 MENKENLEAARKCLTTSLETSSAIASALDESGSRLELLKQRYLALQASLRPISMQKCSFVNIEHGIDSVLCSAAALLKVLDSVHRLEQSLLTDPSSDLHTYVSDTKKLEEALKLLSDNCRLTVGWLKDIYELFQDKAITNELCLLKVKKYLRILQELQVKEEGARLDEGLLSTAFDKLELEFHRLLTANSVPLPLVSLTSPHTGQKTSITKHILPLTSSLAGKLHSITQRLNANGRLHKCQSIYVEVRGMNARRSLKTLDLSYLDIPTTEIEAVQSIESYIDQWGYHLELFAKQLLEIEWRFSAIVFEKIGPEACMGCFAKIAIESGIFSFIRFGRMVTERKNDPFKLLNLLSIFRVLNDLRLKFNQLFSAKACKEIRTVIEDLIKKVVNGANEIFWQLPAQVKLQRPTSPPPDGSVPRLVSFVTDYCNQLLGDAYRPHLTQVVRIHLSWRKEAYEEGIVLCQMYNAIKEVAVNLDAWSKTYEDITLSYLFMMNNHCHFCNLRGTVLGNMMGDSWLRAHEQYRDYYAALYLRNSWGKLLSILVVQKDILSPSSASVTCQDLAKRLTAFNLAFEEGYKKQSDWVISDEILRENVCKHLTKGIIPIYRAYVKNYCLTTENDAKVDKLMKYSAESLENKITSLFQTKQRKGSSIKQADLISKIKYLSHQFRSTLAAI 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11689g00004 674 Pfam Exo70 exocyst complex subunit 284 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium11689g00004 674 PANTHER EXOCYST COMPLEX PROTEIN EXO70 146 641 IPR004140 GO:0000145|GO:0006887
Vium11689g00004 674 SUPERFAMILY Cullin repeat-like 76 641 IPR016159 -
Vium11689g00004 674 Gene3D Exocyst complex component Exo70 134 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11689g00004 Vium-Chr11689 17451 19589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11689g00004 5 674 EXO70 exocyst subunit family AT4G31540 47.059 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11689g00004 K07195 - gmx:121175138 1136.32