Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11679g00002 ATGTCATTTTTCAGTGGCTTATTTGGTGCAAGTTTATTGCATAATCTATTCCTGGAGGCCTTGGATTTGGTGTCTGCAACATTCGCTACAGCAATTTATAATCTTGTTCCTGCAGTCACTTTTATTTTGGCAATCTCGTGCGGCATGGAAAAGTTGAATATGAGAAGCACAGCAGGGAAGGCCAAGGTGGTGGGAACGATTATAGGAATTGGAGGGTCAATGTTTCTGACATTTTTCAAAGGGCAAGAAATTGATGTTAAGAGTTTCCACACTGATCTTCTGCATAAAAATAACCATGTTTTAACTCTGCATAATACTGACTCTAGCCATAGATTTCTGGGTGCTTTGTGTGGTTTTGGAAGCTGCTTCAGTTTTGCATTATGGCTCATCATTCAGTCTAAGATAAACAAAGAATACCCCAGTCATCACTCAAGTACTGCGTTGATGTCCTTAATGGCTGCAATACAAGCCACAGCCTTTGCCCTTTATGTTGAAAAGGACTGGAACCAGTGGAAGTTGTCTTCTAGAATTAGGATTCTAACCGTGGTTTATACGGGAATCGTGGCCTCTGGATTAGTGGTAATCGCCATTGCATGGTGTGTAAAAATGAGAGGTCCGATGTTTGTATCTGTTTTCAACCCTCTGATGCTCGTGCTTGTGGCTGTGGCTGATTGCTTGATGTTAGGTCAAAACTTATATGTAGGAAGTGTGATTGGAGGCGTGCTGATTGTATGTGGCTTGTACATGTTTCTATGGGGTAAAAGCAAAGAAGTGAAAAAGTTGAATAAGACAGTCTCGTCAGAAATCACCCAGAAACATGAAGCAACCGAAGTAGTTGTCATGTCCACCACAACAAATAATGAGAATAGTGACTGCATTACCAGTACCAAACCCAATTGCAAAAGTAACATAGTTGTCAATGTTTCTTGA 930 0.4075 MSFFSGLFGASLLHNLFLEALDLVSATFATAIYNLVPAVTFILAISCGMEKLNMRSTAGKAKVVGTIIGIGGSMFLTFFKGQEIDVKSFHTDLLHKNNHVLTLHNTDSSHRFLGALCGFGSCFSFALWLIIQSKINKEYPSHHSSTALMSLMAAIQATAFALYVEKDWNQWKLSSRIRILTVVYTGIVASGLVVIAIAWCVKMRGPMFVSVFNPLMLVLVAVADCLMLGQNLYVGSVIGGVLIVCGLYMFLWGKSKEVKKLNKTVSSEITQKHEATEVVVMSTTTNNENSDCITSTKPNCKSNIVVNVS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11679g00002 309 Pfam EamA-like transporter family 113 251 IPR000620 GO:0016020
Vium11679g00002 309 SUPERFAMILY Multidrug resistance efflux transporter EmrE 170 256 - -
Vium11679g00002 309 PANTHER WAT1-RELATED PROTEIN 3 266 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11679g00002 Vium-Chr11679 1132 4566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11679g00002 1 289 Nodulin-like Gene Family AT1G25270 38.276 2.92e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11679g00002 - - gmx:100813812 497.278