Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11679g00001 ATGAAGAACCTAGTGCAAGACTTAAAGCCTGTGGTGCTGATGGTATTGGTTCAAATTACATATTCTTCTGTTAATGTGCTGTATAAGCTGGCCATAAATGATGGAATGAGCATTAGGGTAGTCACTGCCTACCGTCTTATTTTTGCAGTAGTTTTCACTTTTTCTCTTGCTCTTATTTTCGAAAGAAAGAGCAGACCAAAGTTGACATGGAGGGTGCTTTTCATGTCATTTTTCAGTGGCTTATTTGGTGCAAGTTTATTGCATAATCTATTCCTGGAGGCCTTGGATTTGGTGTCTGCAACATTCGCTACAGCAATTTATAATCTTGTTCCTGCAGTCACTTTTATTTTGGCAATCTCGTGCGGCATGGAAAAGTTGAATATGAGAAGCACAGCAGGGAAGGCCAAGGTGGTGGGAACGATTATAGGAATTGGAGGGTCAATGTTTCTGACATTTTTCAAAGGGCAAGAAATTGATGTTAAGAGTTTCCACACTGATCTTCTGCATAAAAATAACCATGTTTTAACTCTGCATAATACTGACTCTAGCCATAGATTTCTGGGTGCTTTGTGTGGTTTTGGAAGCTGCTTCAGTTTTGCATTATGGCTCATCATTCAGTCTAAGATAAACAAAGAATACCCCAGTCATCACTCAAGTACTGCGTTGATGTCCTTAATGGCTGCAATACAAGCCACAGCCTTTGCCCTTTATGTTGAAAAGGACTGGAACCAGTGGAAGTTGTCTTCTAGAATTAGGATTCTAACCGTGGTTTATACGGGAATCGTGGCCTCTGGATTAGTGGTAATCGCCATTGCATGGTGTGTAAAAATGAGAGGTCCGATGTTTGTATCTGTTTTCAACCCTCTGATGCTCGTGCTTGTGGCTGTGGCTGATTGCTTGATGTTAGGTCAAAACTTATATGTAGGAAGTGTGATTGGAGGCGTGCTGATTGTATGTGGCTTGTACATGTTTCTATGGGGTAAAAGCAAAGAAGTGAAAAAGTTGAATAAGACAGTCTCGTCAGAAATCACCCAGAAACATGAAGCAACCGAAGTAGTTGTCATGTCCACCACAACAAATAATGAGAATAGTGACTGCATTACCAGTACCAAACCCAATTGCAAAAGTAACATAGTTGTCAATGTTTCTTGA 1152 0.4045 MKNLVQDLKPVVLMVLVQITYSSVNVLYKLAINDGMSIRVVTAYRLIFAVVFTFSLALIFERKSRPKLTWRVLFMSFFSGLFGASLLHNLFLEALDLVSATFATAIYNLVPAVTFILAISCGMEKLNMRSTAGKAKVVGTIIGIGGSMFLTFFKGQEIDVKSFHTDLLHKNNHVLTLHNTDSSHRFLGALCGFGSCFSFALWLIIQSKINKEYPSHHSSTALMSLMAAIQATAFALYVEKDWNQWKLSSRIRILTVVYTGIVASGLVVIAIAWCVKMRGPMFVSVFNPLMLVLVAVADCLMLGQNLYVGSVIGGVLIVCGLYMFLWGKSKEVKKLNKTVSSEITQKHEATEVVVMSTTTNNENSDCITSTKPNCKSNIVVNVS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11679g00001 383 PANTHER WAT1-RELATED PROTEIN 9 338 IPR030184 GO:0016020|GO:0022857
Vium11679g00001 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 330 - -
Vium11679g00001 383 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020
Vium11679g00001 383 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Vium11679g00001 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11679g00001 Vium-Chr11679 1132 4567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11679g00001 8 363 Nodulin-like Gene Family AT1G25270 40.056 3.15e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11679g00001 - - gmx:100813812 620.542