Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11663g00001 ATGTCTTCTGAAGTAGTGGTAGAGGGTATGGAGAACAATGGAAACCATGGAAATACAAAGCAGAAGCATCATATTGAACAAGTTTCTGATGATCCTTCTGCTTTCATGGGGAAGAAGCTTTCATGGCAAAAATTGCGAAGAAATGATTCTCTCGACATGGAATCACGCAGATTCTCCAAATCCTCTCTTTGTAGAGGGCCATCGATGTCAGTGATTATGCAGCTAGCGTTTCAAAGCCTCGGAATTGTTTACGGCGACATAGGTACTTCACCGTTGTATGTGTATGCAAGTACCTTCGTGGATGGAATAAAGAACAACGATGACATATTGGGTGTTCTTTCTTTGATCTTATATACCATCACTCTCATTCCTCTTGTTAAGTACGTATTCATCGTCTTAAAGGCCAATGATAACGGCGATGGAGGGACTTTCGCTTTATACTCTCTGATATGTCGATATGCGAAAGTGGGAATGACTCCAAATCAACAAGTTGAAGATACAGAAGTATCTAATTATAAGTTGGAATTGCCAAAGAGCAACCGTATAAAGATGGCTTCAAGGCTTAAGTCTATGCTTGAGAACAGTTCCTTTGCCAAGCTCTTCCTCTTGCTAGTTACCATGCTTGGCACTTCAATGGTCATTGGGGATGGTGTTCTCACTCCTTGCATTTCCGTTTTATCTGCTGTTGGAGGGATCAAGGAAGCCCATTCTTCAATAACACAGAATGCGGTTGTTGGAATATCCATAGCAATCCTGATATGCCTTTTCATGGTTCAAAGATTTGGAACTGATAAAGTAGGCTACAGTTTCGCTCCTATTATTTGTGTGTGGTTCGCCTTCATTGGAGGCATTGGTCTCTTCAATTTCATCAAGTACGATTCAACAGTTGCCAAAGCAATAAATCCAAAATACATCGTAGATTACTTCAGAAGAAACAAGAAAGATGCTTGGATTTCTCTTGGTGGTGTTGTGCTGGCCATAACAGGAACTGAAGCACTATTTGCTGATGTTGGACATTTCACAGTTCGTTCCATACAAATAAGCATGTGCTCTGTGACATACCCTGCTCTCCTACTTGCCTACACTGGACAAGCCTCATTTCTTCGCAAAAACAACGATCTCGTTTCAGACACTTTCTACAAGTCCATACCACATCCTTTATATTGGCCAATGTTTATTGTTGCTGTTATGGCATCCATTATAGCTTCTCAAGCCATGATCTCCGGGACTTTCTCCATCATCCAACAATCCCTCTCACTTGGATGTTTCCCTCGCGTGAAAATAGTTCATACATCAGCCAAGTACGAAGGACAAGTTTACATCCCCGAAATCAATTTCATTCTTATGATTGCATGCGTTGCAGTCACAGCCGGATTCAAAAGCACCACAAAAATAGGCAATGCTTATGGGATAGCTGTGGTGTTCGTAATGACACTTACATCTGCTTTGGTGGTGTTAATCATGATCATGATATGGAAGACTCAAATACTTTTGGTTATCAGTTACGTGCTTATCATTGGTTCTGTTGAGCTTATCTATTTAAGCTCTGTGCTATATAAATTCAGAGAAGGAGGGTATCTTCCTCTTGCATTTGCTGCGGTGCTAATGAGCATCATGTGCATTTGGCATGACGTGTACAGGAGGAAGTACTATTACGAATTGGATCATAAGATTTCTCCAGAGAAGCTTAAGGGGATTACTAGTGGAAAAAACTTAGCTCGAATGCATGGACTTGCCATATTTTATTCTGAACTTGTTCAAGGCATTCCACCAATTTTCGAACATTATGTTACAAACATTCCTGCAATGCACTCTATGGTTGTGTTTGTGTCGATCAAATCATTGCCTGTTAGCAAAGTTGCTGCAGAAGAGCGGTTTCTGTTTAGGCAAGTGGAACATGAAGAACTCAGTGTGTTTCGATGTGTGGCCAGATACGGATACACTGATGTGCAGAACGAGGAAGAGGCTTTTGAGAATTTGTTGGTTAAGAGGCTGAAGGAATTTATAGGTGGTGGATTTTTGGCATCCGAAAGAGTTGTACTTGAAGATAAAACTGAAGAAATAGTGAATAGTGGTGAGTTTGAAGGTGTTGAAAAAGAGGTGGAAGCCATTGAAAAAGCAGTGCGAGGAGGTGTTGTTCATTTGATTGGTGAGAGTGAGGTGGTTGCTAGCAAAGGAGCCAGCATAAGGAAAAGGATTCTAATAAACTATGCTTACAATTTCTTGAAAAAGAACTTGAGGCAAAGTGATAAACTATTTGATATTCCTCACAAGCGTATGGTCAAAGTGGGCATGACTTATGAACTTTGA 2310 0.4069 MSSEVVVEGMENNGNHGNTKQKHHIEQVSDDPSAFMGKKLSWQKLRRNDSLDMESRRFSKSSLCRGPSMSVIMQLAFQSLGIVYGDIGTSPLYVYASTFVDGIKNNDDILGVLSLILYTITLIPLVKYVFIVLKANDNGDGGTFALYSLICRYAKVGMTPNQQVEDTEVSNYKLELPKSNRIKMASRLKSMLENSSFAKLFLLLVTMLGTSMVIGDGVLTPCISVLSAVGGIKEAHSSITQNAVVGISIAILICLFMVQRFGTDKVGYSFAPIICVWFAFIGGIGLFNFIKYDSTVAKAINPKYIVDYFRRNKKDAWISLGGVVLAITGTEALFADVGHFTVRSIQISMCSVTYPALLLAYTGQASFLRKNNDLVSDTFYKSIPHPLYWPMFIVAVMASIIASQAMISGTFSIIQQSLSLGCFPRVKIVHTSAKYEGQVYIPEINFILMIACVAVTAGFKSTTKIGNAYGIAVVFVMTLTSALVVLIMIMIWKTQILLVISYVLIIGSVELIYLSSVLYKFREGGYLPLAFAAVLMSIMCIWHDVYRRKYYYELDHKISPEKLKGITSGKNLARMHGLAIFYSELVQGIPPIFEHYVTNIPAMHSMVVFVSIKSLPVSKVAAEERFLFRQVEHEELSVFRCVARYGYTDVQNEEEAFENLLVKRLKEFIGGGFLASERVVLEDKTEEIVNSGEFEGVEKEVEAIEKAVRGGVVHLIGESEVVASKGASIRKRILINYAYNFLKKNLRQSDKLFDIPHKRMVKVGMTYEL 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11663g00001 769 NCBIfam potassium uptake protein 75 768 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium11663g00001 769 MobiDBLite consensus disorder prediction 1 28 - -
Vium11663g00001 769 Pfam K+ potassium transporter 76 649 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium11663g00001 769 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 49 768 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium11663g00001 769 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11663g00001 Vium-Chr11663 1965 5693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11663g00001 21 769 Inorganic Solute Cotransporters AT4G13420 55.527 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11663g00001 K03549 - qsa:O6P43_010741 1122.46