Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11640g00002 ATGGCATCCAACAGGGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCAGAACAAGAGGCCCAACGGATTGTGAATGCTGCAAAAGCTGAAAAACTGGCCAGGTTGAAACAAGCCAAAGAAGAGGCTGAAAAAGAGATTGCAGAGTACCGAGCTCAACTGGAGCGTGAGTTTCAAAAGAAAGTTTCAGACAGTACTGGTGATTCTGGAGCTAATGTCAAGCGGCTTGAGCAAGAAACTGAAGCAAAAATTCAGAACCTGAAAACGGAGGCTGCAAAAATTTCGGATGATGTTGTCGCCATGCTTCGTACGTATGTTACAAGTGTGAAAAATTAG 333 0.4444 MASNRGQGGIQQLLAAEQEAQRIVNAAKAEKLARLKQAKEEAEKEIAEYRAQLEREFQKKVSDSTGDSGANVKRLEQETEAKIQNLKTEAAKISDDVVAMLRTYVTSVKN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11640g00002 110 Gene3D - 1 110 - -
Vium11640g00002 110 Coils Coil 10 59 - -
Vium11640g00002 110 FunFam V-type proton ATPase subunit G 3 110 - -
Vium11640g00002 110 NCBIfam V-type ATPase subunit G 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vium11640g00002 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vium11640g00002 110 Coils Coil 72 96 - -
Vium11640g00002 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11640g00002 Vium-Chr11640 4612 7124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11640g00002 1 110 Primary Pumps ATPases(2) AT3G01390 71.818 4.02e-43 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11640g00002 K02152 - gmx:100306550 157.918