Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1159g00059 ATGATTACGGTTCGAGACTCCCTAACTTCAGGAGCCTTTCATAGTATTTATAAGCATTCAACTACTCAAGCAATGATGATTGATAAACAACAGCACCCAAGGATCGAGCAAAAGCTTGCTGGCCAGCTTCACTTGAGATCCAACTCCAACCTTTCCCCACATGTTGGAACTTGTTACGGAGGTTCACCAGTGTTCATCCCATCGCCTTCGGAGAAAAACTGGGGAAGGTTTGCCACTGATTTTCTCATGGGTGGAGTTTCTGCGGCAGTGTCCAAGAGTGCAGCTGCTCCGATTGAGCGTGTAAAGCTTCTCATTCAAAATCAGGATGAGATGATCAAAGCGGGCAGGCTCTCTGAACCCTACAAGGGCATTGGAGATTGCTTTGGAAGAACAATCAAAGATGAAGGGTTTGTTTCATTGTGGAGAGGGAACACTGCTAATGTTATCCGTTACTTCCCAACACAGGCCTTGAATTTTGCATTTAAAGACTACTTTAAGAAGCTGTTCAACTTCAAGAAAGACAGGGATGGATACTGGAAATGGTTTGCAGGGAACGTAGCATCTGGTGGTGCAGCAGGAGCCGTGTCTTCAGTGTTTGTATATTCATTGGATTACGCTCGAACCCGCCTTGCCAGTGATGCCAAGGCTGGAAAGAAGGGTGGAGAGAGGCAATTCAATGGCTTGATCGATGTGTACAGGAAGACTATTCAATCAGACGGCGTTGCTGGCCTCTACCGTGGCTTCAACGTATCTTGCGTTGGAATCATTGTCTACCGTGGTTTATACTTTGGCATGTATGATTCTCTGAAACCAGTGGTCTTGGTGGGAACTTTGCAGGATAGTTTCTTGGCTAGCTTTGCTCTGGGGTGGCTGGTTACTATCAGTGCAAGCATTTCCTCGTACCCCTTGGATACGGTTCGCAGAAGAATGATGATGACATCGGGTGAAGCTGTGAAGTACAAAAGCTCTTTGGATGCATTCTCGCAAATCGTGAAGAATGAAGGTTCAAAATCTCTCTTCAAGGGTGCCGGCGCAAACATCCTTCGTGCAGTTGCAGGTGCTGGTGTGCTTGCTGGTTATGACAAACTTCAGTTACTTGTTCTTGGAAAGAAGTATGGTTCTGGTGGGGCTTGA 1134 0.4647 MITVRDSLTSGAFHSIYKHSTTQAMMIDKQQHPRIEQKLAGQLHLRSNSNLSPHVGTCYGGSPVFIPSPSEKNWGRFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFVSLWRGNTANVIRYFPTQALNFAFKDYFKKLFNFKKDRDGYWKWFAGNVASGGAAGAVSSVFVYSLDYARTRLASDAKAGKKGGERQFNGLIDVYRKTIQSDGVAGLYRGFNVSCVGIIVYRGLYFGMYDSLKPVVLVGTLQDSFLASFALGWLVTISASISSYPLDTVRRRMMMTSGEAVKYKSSLDAFSQIVKNEGSKSLFKGAGANILRAVAGAGVLAGYDKLQLLVLGKKYGSGGA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1159g00059 377 FunFam ADP,ATP carrier protein, mitochondrial 78 373 - -
Vium1159g00059 377 SUPERFAMILY Mitochondrial carrier 75 362 IPR023395 -
Vium1159g00059 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 280 366 IPR018108 -
Vium1159g00059 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 168 IPR018108 -
Vium1159g00059 377 Pfam Mitochondrial carrier protein 74 172 IPR018108 -
Vium1159g00059 377 Pfam Mitochondrial carrier protein 179 272 IPR018108 -
Vium1159g00059 377 Pfam Mitochondrial carrier protein 281 367 IPR018108 -
Vium1159g00059 377 PRINTS Mitochondrial carrier protein signature 245 263 IPR002067 GO:0055085
Vium1159g00059 377 PRINTS Mitochondrial carrier protein signature 80 93 IPR002067 GO:0055085
Vium1159g00059 377 PRINTS Mitochondrial carrier protein signature 93 107 IPR002067 GO:0055085
Vium1159g00059 377 PRINTS Mitochondrial carrier protein signature 143 163 IPR002067 GO:0055085
Vium1159g00059 377 PRINTS Mitochondrial carrier protein signature 195 213 IPR002067 GO:0055085
Vium1159g00059 377 PRINTS Mitochondrial carrier protein signature 289 311 IPR002067 GO:0055085
Vium1159g00059 377 Gene3D Mitochondrial carrier domain 78 373 IPR023395 -
Vium1159g00059 377 PRINTS Adenine nucleotide translocator signature 180 193 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vium1159g00059 377 PRINTS Adenine nucleotide translocator signature 285 301 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vium1159g00059 377 PRINTS Adenine nucleotide translocator signature 154 166 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vium1159g00059 377 PRINTS Adenine nucleotide translocator signature 77 89 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vium1159g00059 377 PRINTS Adenine nucleotide translocator signature 121 142 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vium1159g00059 377 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 70 376 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vium1159g00059 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 180 272 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1159g00059 Vium-Chr1159 308160 311337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1159g00059 26 377 Antiporters AT5G13490 72.468 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1159g00059 K05863 - gmx:100800843 604.749