Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1159g00046 ATGGAGTACTCTGTGGAATCTTTGGGAAGAGATCTTAAGAACGTGAGGAAGTACTTCGGGAGTGGAAAAACAAAGGAAGCATCATGGAGAGAATCACAGCTTAAACGGTTGCACAGTTTTCTAGTTGAAAGAGAGCAAGAAATTTTGAATGCCCTCAAGCAAGATTTGGGGAAGCATTGCGTTGAGGCCTTCAGAGATGAGGTAGGAACGTTGGTGAAGACCTTAAACTACGCCATAAAGCATTTGAAAAAATGGATGGCGGGGGAAGAGGCTAAATTGCCAAAAATAGCACTGCTTTCCAGTGCTGAGATAGTTCCTGAGCCACTCGGTCTTGTTCTCATAATCTCATCATGGAACTTCCCTTTTGGACTGTCCTTGGAGCCACTGATAGGAGCAGTAGCTGCTGGAAACACTGCAGTTCTGAAGCCTTCCGAGATGTCCCCTACTTGCTCTTCTCTTTTAGCCACCGTCCTTCCAACTTACTTGGACAACAATGCCATTAAAGTCATCCAAGGTGGACCAGAAGTGGGAGAGCTACTCTTACAGCAAAGATGGGATAAGATTTTCTTCACAGGAAGTGAAAGGGTGGGAAGAATTGTTATGTCTGCTGCAGCTGTGCATCTTACTCCAGTGACTTTGGAGTTGGGTGGAAAATGTCCGGCACTGGTTGATTCTCTTACTTCTTCTTGGGACAGAAAGGTGGCTGTGAAACGAGTTTTGGTGGCAAAATTCGGGGCTTGTGGAGGACAAGCGTGCATAGCAATCGATTATGTTCTTGTAGAGAAGAGTTTCAGTTCTACATTGGTGACATTGATGAAGGATTGTATTAAGAAAATGTTTGGAGAAAATCCTAAAGAGTCGAACACTGTTGCAAGGATAGTTAATGAGAAACATTTCATGAGACTGAAGAATCTTCTCACCGATCCAAGGGTGAAAGAGTCGGTGGTTTTTGGAGGTTCAATGAACGAAAATGACTTATTTATTGAACCAACAATATTGTTGGATCCTCCGCTTGATTCAGCAATCATGACTGGGGAAATCTTTGGCCCGGTGCTTCCAATTATCACTCTGGAGAAGATTGAAGACAGTGTCGAGTTCATAAGCTCAAGGCCTAAACCATTAGCAATCTATGCCTTCACGAAAAACCAAACTCTGCAGAGAAGAATGTTATCTGAAACATCATCCGGAAGTCTTGTTTTCAACGATGCAATTCTACAGTACGTAGCGGATACCCTACCATTTGGAGGAATTGGGGAAAGTGGGTTTGGCAAGTACCATGGGAAGTTTTCCTTTGACGCGTTCAGTCACCCTAAGGTCGTGGCCAGAAGAAGTTACTTCACTGATTTTTGGTACAGATTTCCTCCATGGACTCTTAACAAGCTCCAACTACTTGAGGTGTCTTACAATTTGGATTATCTTGGAATACTTCTAGTTCTGCTTGGCTTAAAGAAGTCAAAACGGTCCTTATTTTATGCTTGTAATTGA 1485 0.431 MEYSVESLGRDLKNVRKYFGSGKTKEASWRESQLKRLHSFLVEREQEILNALKQDLGKHCVEAFRDEVGTLVKTLNYAIKHLKKWMAGEEAKLPKIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTAVLKPSEMSPTCSSLLATVLPTYLDNNAIKVIQGGPEVGELLLQQRWDKIFFTGSERVGRIVMSAAAVHLTPVTLELGGKCPALVDSLTSSWDRKVAVKRVLVAKFGACGGQACIAIDYVLVEKSFSSTLVTLMKDCIKKMFGENPKESNTVARIVNEKHFMRLKNLLTDPRVKESVVFGGSMNENDLFIEPTILLDPPLDSAIMTGEIFGPVLPIITLEKIEDSVEFISSRPKPLAIYAFTKNQTLQRRMLSETSSGSLVFNDAILQYVADTLPFGGIGESGFGKYHGKFSFDAFSHPKVVARRSYFTDFWYRFPPWTLNKLQLLEVSYNLDYLGILLVLLGLKKSKRSLFYACN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1159g00046 494 PIRSF ALDH 2 476 IPR012394 GO:0006081
Vium1159g00046 494 FunFam Aldehyde dehydrogenase 16 220 - -
Vium1159g00046 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Vium1159g00046 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Vium1159g00046 494 SUPERFAMILY ALDH-like 13 457 IPR016161 GO:0016491
Vium1159g00046 494 Pfam Aldehyde dehydrogenase family 17 440 IPR015590 GO:0016491
Vium1159g00046 494 PANTHER ALDEHYDE DEHYDROGENASE 6 475 IPR012394 GO:0006081
Vium1159g00046 494 FunFam Aldehyde dehydrogenase 217 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1159g00046 Vium-Chr1159 238037 241341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1159g00046 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 54.132 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1159g00046 K00128 - gmx:100798020 853.973