Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1159g00025 ATGAAGACCATAAAGTCAACGTTCCTCGTTGTGTGTGTCTTGGCCGCTCTCGTCTGTCCAACCAAGGCTCACGGAGGAGGTGGTGATGATTCTCACGATGATGATTCCCACAGCGAAGATTTACATGCCAAGAGTCTGATCCTTGTCAAAATATGGTGTTTGATCATCTTCTTTGTGAGCACTTTCGCTGGTGGGGTGTCTCCGTATTTCTACCGATGGAACGAGACTTTTCTTCTTCTGGGGACTCAGTTCGCTGCTGGGGTTTTCTTGGGAACCTCCTTGATGCATTTCTTGAGCGATTCTAACGAGACCTTCCGAGACCTGACCACAAAATCTTACCCTTTTGCCTTCATGCTCGCCTCATCTGGCTACCTTCTCACCATGCTTGGTGACTGCGTTATCGTTTTTGTCACCAGCAATAGCAGGAAGGAAGCCAAAGTGTTGGAACTGGAAGGTGGGACAACACCACAGGATCATGACCTGGCTGGAAATCACTGTGCAGTGGACACCACAAACCCTATGTTATTGAAGACTTCTTCTGTGGGAGACACCATTCTTCTCATCCTTGCACTGTGCCTCCATTCGATTTTTGAGGGCATTGCAGTTGGAGTTGCAGGTACTAAAGCGGATGCATGGAGGAACTTATGGACAATATCCTTACACAAGATATTTGCTGCCATTGCAATGGGAATTGCTTTGCTGAGGATGTTACCTAAGAGACCCTTAGTAACAACTGCAGCATATTCTTTCGCCTTTGCTATCTCAAGCCCCATCGGTGTGGGGATTGGCATTGCCATAAACGCTACAACACAAGGACGCACAGCAGATTGGATGTTTGCTATAACAATGGGTATTGCTTGTGGGGTGTTTATCTATGTTGCCATCAATCATTTAATATCCAAAGGCTTCAAACCGCAGAAACCAACGCGTTTCGACACTCCCTGGTTTAGGTTTCTCGCTGTGCTTTCTGGTGTAGCTGTTATGGCAGTTGTCATGATCTGGGACTGA 1008 0.4692 MKTIKSTFLVVCVLAALVCPTKAHGGGGDDSHDDDSHSEDLHAKSLILVKIWCLIIFFVSTFAGGVSPYFYRWNETFLLLGTQFAAGVFLGTSLMHFLSDSNETFRDLTTKSYPFAFMLASSGYLLTMLGDCVIVFVTSNSRKEAKVLELEGGTTPQDHDLAGNHCAVDTTNPMLLKTSSVGDTILLILALCLHSIFEGIAVGVAGTKADAWRNLWTISLHKIFAAIAMGIALLRMLPKRPLVTTAAYSFAFAISSPIGVGIGIAINATTQGRTADWMFAITMGIACGVFIYVAINHLISKGFKPQKPTRFDTPWFRFLAVLSGVAVMAVVMIWD 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1159g00025 335 PANTHER ZINC/IRON TRANSPORTER 49 330 - -
Vium1159g00025 335 Pfam ZIP Zinc transporter 48 331 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1159g00025 Vium-Chr1159 144113 145702 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1159g00025 20 335 Inorganic Solute Cotransporters AT1G55910 57.975 1.28e-131 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1159g00025 K14709 - gmx:100788541 556.984