Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1159g00023 ATGGCTTCATCCAGCACAACGTTCCTCGTTGTGTGTCTTTTAGCCTCGCTTCTCTATCCAATCAAGGGTCTCCGAGGGGAATCTGACACAGAAAGCTTGCGTTCCAAGGGTCTGATATTGGTGAAACTATGGTGTTTGATCATCATGCTTGTGAGCACTTTCGCTGGAGGGGTGTCTCCCTACTTCTTCCGCTGGAATGAGACTTTTCTTGTGTTGGGGACTCAGTTCGCTGGTGGGGTTTTCTTGGGAACTTCTTTGATGCATTTCTTGGGCGATTCTAATGAGACTTTTCGAGAGCTCACCACAAAAACTTACCCTTTTGCCTTTATGCTGGCTTCATCTGGGTACCTTCTCACCATGCTTGGTGACTGCGTAGTGGGCTTTGTCAGCAGCAATACCCAGACGAAACCCAAAGTGGTGGAACTGGAAGGAGGGTCACCATCCCAACAGCATGACCAAACCACAGATCACTGCGCAGTGGAGGCAACAAACCCTATACTGTTGAAAACTTCCTCCACGGGAGACACCATTCTACTCATCCTTGCACTTTGCTTCCATTCAGTTTTTGAGGGCATTGCCGTTGGAGTTGCAGGTACGAAGAGAGAAGCATGGAAGAACCTGTGGACAATATCTTTACACAAGATATTTGCTGCGATCGCAATGGGAATTGCTTTGTTAAGGATGTTACCTAAGAGACCCTTATTAACAAGTGCAGTATATTCTTTGGCCTTTGCAGTATCAAGCCCCGCTGGTGTGGTGATTGGAATTGCCATAGACGCGACAACTCAAGGAAACACCGCAGATTGGATGTTTGCCATAACGATGGGAATTGCTTGTGGAGTGTTCATCTATGTTGCCATCAATCACTTAATAGCCAAAGGCTTCAAACAGAAGGGGACAAGCCGTTTCGACACCCCCTGGTTTAGATTTCTCGCAGTGCTTTCTGGTGTAGCTGTTATTGCAGTTGTCATGATCTGGGACTGA 984 0.4715 MASSSTTFLVVCLLASLLYPIKGLRGESDTESLRSKGLILVKLWCLIIMLVSTFAGGVSPYFFRWNETFLVLGTQFAGGVFLGTSLMHFLGDSNETFRELTTKTYPFAFMLASSGYLLTMLGDCVVGFVSSNTQTKPKVVELEGGSPSQQHDQTTDHCAVEATNPILLKTSSTGDTILLILALCFHSVFEGIAVGVAGTKREAWKNLWTISLHKIFAAIAMGIALLRMLPKRPLLTSAVYSLAFAVSSPAGVVIGIAIDATTQGNTADWMFAITMGIACGVFIYVAINHLIAKGFKQKGTSRFDTPWFRFLAVLSGVAVIAVVMIWD 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1159g00023 327 Pfam ZIP Zinc transporter 40 323 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vium1159g00023 327 PANTHER ZINC/IRON TRANSPORTER 41 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1159g00023 Vium-Chr1159 133119 134238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1159g00023 30 327 Inorganic Solute Cotransporters AT1G55910 57.843 4.87e-125 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1159g00023 K14709 - gmx:100776614 552.747