Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11587g00005 ATGTCAACTTCTCTGCGTGAAAACTCTTCAATCTGGTTTTTCCTTCCAATCGCTACCTTAATCATCTTCTTTTTACGAACTGTCATCAAATGCAGTCATAATTTCAATTCTGCAATGGCCAGAAAAACCTTACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAATCTCCACCAACTTGGCACTCTCACTCACCGCACTCTCCATTCCTTTGCTCAAACCTATGGCCCTTTAATGTTACTTCACTTTGGAAAGGTGCCAGTTCTTGTTGTCTCAACGGCCGAGGCAGCTCGTGAGGTTATGAAAACCCATGACCTTGTTTTCTCCAATAGACCACATCGTAAGATGTTTGATATCTTCTTGTACGATTCCAAAGATGTGGCATCTGCTCCATATGGCAACTACTGGAGGCAGATAAGGAGTATCTCTGTCTTGCATCTTCTCAGTGCAAAAAAGGTTCAATCCTTCGGTGCAGTGAGAGAAGAGGAAATCTCCATAATGATGGATAAGATTAAGCAATGTTGTTGTTCTGTGACGCCTGTGAATTTAACTGATTTATTTTCTACGGTCACAAATGACATAGTGTGCAGAGCTGTTCTCGGAAGGAGATACAGCAGAAGAGAAGGGAGTAAGTTTTGGGAGCCAATGAACGAGATGATGAAGATGTTGGGTGCTCCAGTTATAGGGGATTGTATACCTTGGCTTGATTGGGTGGGAAGAGTTAATGGAATGTATGGTAGGGCAAAGAGATTGGCTAAACAGCTTAGTGAATTTTTTGATGAAGTTGTTGATGAGCATGTAAGTAGAAGAGGGTATGATGTGCATGGTGATGATGATGATGACGATGAACAGAATGATTTGGTAGACATTTTGCTGAGGATCCAAAAGACAAACGCCTTGGGGTTCCAGATTGATAAAACAATCATGAAGGCTATAATCCAGGATATGTTTGTCGGAGGCACTGAAACTGGCTCCACAAGCCTAGAATGGATAATGACAGAACTCTTGAGGCACCCAAATGTGATGCAGAAGCTAAAAGATGAGATAAGGAATGTGGTTGATGGTAGAACTCGCATAACTGAGGAAGATTTAAACAGCATGCCTTATTTGAAAGCAGTGATTAAAGAAAGTTTTCGATTACATCCCCCAGCTCCCTTGTTGCTTCCAAGGGAATCCATGGATGATGCCAAAGTGATGGACTATGACATTGCAGCAGGCACACAAGTAATAGTTAATGCTTGGGCAATAGCAAGAGATCCTTGTTATTGGGAAAAACCTGAAGAGTTTGAAGCAGAGAGATTCTTAAAGCGTTCAATAGATGTGAAAGGACATGATTTTGAAGTGATACCATTTGGAGCAGGAAGAAGAGGTTGTCCAGGAATAATGTTTGCCATGAATATGATTGAGTTGGTCATAGCAAACCTTGTTCATCAGTTTAATTGGGAAGTGCCAGGTGGAGTAATGGGTGATCAGACACTCGACATGGCTGAATATGCAGGGTTGACCTGTGGTAGAAAATTTCCTCTCATAGCATTTGCCTCTTACCAGGCATAA 1554 0.4176 MSTSLRENSSIWFFLPIATLIIFFLRTVIKCSHNFNSAMARKTLPPSPPKLPIIGNLHQLGTLTHRTLHSFAQTYGPLMLLHFGKVPVLVVSTAEAAREVMKTHDLVFSNRPHRKMFDIFLYDSKDVASAPYGNYWRQIRSISVLHLLSAKKVQSFGAVREEEISIMMDKIKQCCCSVTPVNLTDLFSTVTNDIVCRAVLGRRYSRREGSKFWEPMNEMMKMLGAPVIGDCIPWLDWVGRVNGMYGRAKRLAKQLSEFFDEVVDEHVSRRGYDVHGDDDDDDEQNDLVDILLRIQKTNALGFQIDKTIMKAIIQDMFVGGTETGSTSLEWIMTELLRHPNVMQKLKDEIRNVVDGRTRITEEDLNSMPYLKAVIKESFRLHPPAPLLLPRESMDDAKVMDYDIAAGTQVIVNAWAIARDPCYWEKPEEFEAERFLKRSIDVKGHDFEVIPFGAGRRGCPGIMFAMNMIELVIANLVHQFNWEVPGGVMGDQTLDMAEYAGLTCGRKFPLIAFASYQA 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11587g00005 517 Gene3D Cytochrome P450 32 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PANTHER CYTOCHROME P450 71B11-RELATED 29 513 - -
Vium11587g00005 517 SUPERFAMILY Cytochrome P450 45 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Vium11587g00005 517 FunFam Cytochrome P450 83B1 32 512 - -
Vium11587g00005 517 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00005 517 CDD CYP71-like 74 509 - -
Vium11587g00005 517 Pfam Cytochrome P450 45 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11587g00005 Vium-Chr11587 30436 32460 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11587g00005 41 514 Cytochrome P450 AT3G48270 49.684 2.43e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11587g00005 - - vum:124838435 773.852