Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11587g00001 ATGCAGAAGCTAAAAGATGAGATAAGGAATGTGGTTAATGGTAGAACTCGCATAACTGAGGAAGATTTAAACAGCATGCCTTATTTGAAAGCAGTGATTAAAGAAAGTTTTCGATTACATCCCCCAGTTCCCCTTTTGCTTCCAAGGGAATCCATGGAAGATGCCAAAGTGATGGACTATGACATTGCAGCAGGCACAGAAATAATAGTGAATGCATGGGCAATAGCAAGAGATCCTTGTTACTGGGAAAATCCTGAAGAGTTTGAAGCAGAAAGATTCTTAAAGAGTTCAATAGATGTGAAAGGACATGATTTTGAAGTGATACCATTTGGAGCAGGAAGAAGGGGTTGTCCAGGAATAATGTTTGCCATGAATGTGATTGAGTTGGTCATAGCAAACCTTGTTCATCAGTTTAATTGGGAAGTGCCAAGTGGAGTAGTGGGAGATCAGACACTCGACGTGACTGAAACTGCAGGGTTGACCAGTCATAGAAAATTTCCTATCATAGCATTTGCGTCCTACCATGCATAA 531 0.4068 MQKLKDEIRNVVNGRTRITEEDLNSMPYLKAVIKESFRLHPPVPLLLPRESMEDAKVMDYDIAAGTEIIVNAWAIARDPCYWENPEEFEAERFLKSSIDVKGHDFEVIPFGAGRRGCPGIMFAMNVIELVIANLVHQFNWEVPSGVVGDQTLDVTETAGLTSHRKFPIIAFASYHA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11587g00001 176 PRINTS P450 superfamily signature 31 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00001 176 PRINTS P450 superfamily signature 108 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00001 176 PRINTS P450 superfamily signature 117 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00001 176 PRINTS E-class P450 group I signature 117 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00001 176 PRINTS E-class P450 group I signature 107 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00001 176 PRINTS E-class P450 group I signature 30 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00001 176 PRINTS E-class P450 group I signature 71 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00001 176 Pfam Cytochrome P450 1 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00001 176 Gene3D Cytochrome P450 1 171 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11587g00001 176 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 110 119 IPR017972 GO:0005506|GO:0016705
Vium11587g00001 176 PANTHER CYTOCHROME P450 71B11-RELATED 1 172 - -
Vium11587g00001 176 SUPERFAMILY Cytochrome P450 1 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11587g00001 Vium-Chr11587 7 733 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11587g00001 1 173 Cytochrome P450 AT3G48310 48.851 7.37e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11587g00001 - - vum:124820743 353.599