Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11545g00001 ATGGAAGAAGTTAAAGTACATGCTAAAGCTTTCAAAATGATGAACAATCTAAGGATTCTTATGCTCTATTCTTATTCTAATTATTGGTATCGAAATGTGTTTCTTGAATCATCTCTAGTAAGTCTGCCAGACACTTTGAAGATTCTTTATTGGACTGGTTTCCATAAAAAATCTTTGCCATCAAATTTTTGCCCACAAAATCTTGTGAGACTCGAGATGCCAGGATGTCATCTTGAACAACTATGGAAAGGAGATCAGAGTTTACCGAAGTTGAAAAGGCTCAACCTGAGTTGTTCTCGGGAACTTACTAGAATACAAGACCTTTCCCTGTCACCAAATATTGAAGAAATAATTCTCAATAATTGTGGAAAATTGATTAAAGTTCACTCTTCCATATTACTCACCAAGCTCACTTGTTTACGATTAGATGGATCTCATAATCTCAATAGTGCAATTGTTCCCAGCAATATTCTATCCAGATCACCAGGATTGATTCTTCTTTCCTCGTGTGCCAAGCTTACAATGTTTTCAACCAGTCAACCCAGATTCCCTCATGTGAAACTGGAGCGTCATCGTGGAACTATCTCAAGATCCCCTCCTAAGAAACCGGAGTATCAACCTGGAACTGTCTCAAGTTTCCCTCGTTTGAAACAGCAGTTACACGGACGTAGAGCTTTCCCAAGATCCTCTGTTAGGGATGGTCTGGGTGAACTTCATACTGGCTCAAAAGAAGTGTTTAAGGAGTGTCAAGTTGAACGTTATCCTCTCTCAAGGATATCCCTTCCCAGTAAAATTTTCTCAATTATTTTTATGAGATATGTGGAAGAAGAAAAAGAAGTGACTAATAATAATATATACGTATATGATGAAAC 872 0.3761 MEEVKVHAKAFKMMNNLRILMLYSYSNYWYRNVFLESSLVSLPDTLKILYWTGFHKKSLPSNFCPQNLVRLEMPGCHLEQLWKGDQSLPKLKRLNLSCSRELTRIQDLSLSPNIEEIILNNCGKLIKVHSSILLTKLTCLRLDGSHNLNSAIVPSNILSRSPGLILLSSCAKLTMFSTSQPRFPHVKLERHRGTISRSPPKKPEYQPGTVSSFPRLKQQLHGRRAFPRSSVRDGLGELHTGSKEVFKECQVERYPLSRISLPSKIFSIIFMRYVEEEKEVTNNNIYVYDET 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11545g00001 291 Gene3D Ribonuclease Inhibitor 4 192 IPR032675 -
Vium11545g00001 291 MobiDBLite consensus disorder prediction 189 211 - -
Vium11545g00001 291 SUPERFAMILY L domain-like 9 168 - -
Vium11545g00001 291 Pfam Leucine Rich Repeat 67 86 IPR011713 -
Vium11545g00001 291 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 177 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11545g00001 Vium-Chr11545 14 3802 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11545g00001 10 157 WRKY Transcription Factor Family AT5G45050 36.000 5.65e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11545g00001 - - vum:124820713 589.341