Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11533g00001 ATGGGGCCACATGAAGTTGACGTTGTCGGCAAGAGGGGAAAAGTTTTGAATATTTGGTATTTCGTTGAACGATACTGTTGTCAAAATGGGTTAAAATCTATGGATCAGCATGGCCTACTACGGAATGACCATTACAGTGATCGGAGGCAAGAAATTCATGAAAGGCAAACTGATCAGTGGAGAATGATGATTGTGTTCGGCGATCGGTACCTGCTGAAGTTGGTGGAGTTCATGGAGGAGCAAGCGGGTCCTCTAACCTCCACCTATGTGCAACCGAGGTTAAAGGCGCTAACGAGGTTGAGAGCCTCCTTGTTGTTATCTGAGTTCCCTGGCTCCTGCGCCATTGGCCACGTCCGCTACTCCACCGCTGGCCACTCTAAGCTCGTGAACGTCCAACCCTTCGTCGCCGGCTACCGTTTCGGCTCCGTCGCAGTCGCGCACAATGGAAACTTCGTGAACTACCGCTCCCTAAGCGCCAAACTGGAAGACAACAGGTCCATCTTCAATACGACCTTCGACACCGAGGTCGTGCTCCACCTGATTGCCGCCTCCAAGCACAGACCTTTCCTCCTTAGAGTCGTGGATGCCTGCGAGAATCTGAAGGGGGCGTACTCCCTGGTGCTCCTCACGGAGGACAAGCTGGTGGCTGTGAAGGACCCCTTCAGATTCCGACCTTTGGTGATGGGAAGGAGAAAGAATGGCGCTGTGGTTTTCGCCTCGGAGACATGCGTGTTGGATTTGATCGATGCGACGTATGAGAGAGAGGTGAACCCGGGTGAGGTTGTGGTGGTGGACCACACGGGAATCCAATCCCTCTGCCTCGTGACTCATCAGGAGCCAAAGCATTGCATATTCAAGCACATATACTTCGCACTTCCCAACTCTGTTGTCTTCGGGAGGTCTGTGTATGAGTCTAGGAGGAAATTCGGGGAAATATTGGCCACTGAGAGCCCCGTTGAGTGCGACGTTGTGATTGCGGTTCCCGATTCTGGGGTGGTGGCTGCGCTTGGCTATGCTGCAAAAGCTGGGGTTCCCTTTCAACAGGGGTTGATAAGGTCGCACTATGTGGGGAGGACTTAA 1080 0.5296 MGPHEVDVVGKRGKVLNIWYFVERYCCQNGLKSMDQHGLLRNDHYSDRRQEIHERQTDQWRMMIVFGDRYLLKLVEFMEEQAGPLTSTYVQPRLKALTRLRASLLLSEFPGSCAIGHVRYSTAGHSKLVNVQPFVAGYRFGSVAVAHNGNFVNYRSLSAKLEDNRSIFNTTFDTEVVLHLIAASKHRPFLLRVVDACENLKGAYSLVLLTEDKLVAVKDPFRFRPLVMGRRKNGAVVFASETCVLDLIDATYEREVNPGEVVVVDHTGIQSLCLVTHQEPKHCIFKHIYFALPNSVVFGRSVYESRRKFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRT 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11533g00001 359 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 105 359 - -
Vium11533g00001 359 Pfam Glutamine amidotransferase domain 131 245 IPR017932 -
Vium11533g00001 359 CDD PRTases_typeI 310 359 IPR000836 -
Vium11533g00001 359 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 1 267 IPR017932 -
Vium11533g00001 359 SUPERFAMILY PRTase-like 282 359 IPR029057 -
Vium11533g00001 359 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 48 327 IPR029055 -
Vium11533g00001 359 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 97 300 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11533g00001 Vium-Chr11533 1663 8060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11533g00001 106 359 PRT Gene Family AT2G16570 78.740 3.28e-144 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11533g00001 K00764 - var:108330186 439.884