Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11519g00003 ATGCATTTCCCCATTCTCTTTCTCCTTCTCCTACCTTCCCTCTTCAAGCTTTCACATTCAGCCACAATTCTCGTAGACGGATCTTCAGAGTGGAAGAACCCCACAGTTTCCATCGGTGATTCCATCATTTTCAAGCACAAACAACATTTCAACCTCTACATTTTCAAGAACGAGAAAGCCTACAATCTCTGCAATATCACCCAAGCCACTCTTCTCACCAACCCCTACACGTGGCATCCATCACGACCCGGTTTCTTCTATTTTACCTTCCACGATGGGTCACTCAGGGCATGCAAAGATTCTGAAAAGCTAGCCATAGAAGTTGCTTCTTCAGCAACGGTTCCAGAACCTTCTCCAGTGGCAACACCAGCTCCTTCTTCTGGTGGAGAGGTACCATCTTCCCCTTCATTTCCGTGGCCGTTTCGTCCACATCAAGCTGCTTCTTCACCTGGCCCAGCACCACAAGCACAAGCAGGTTCACCGGTGACGGTTCCGTTAGTGCCAGATAAAGGTGGCATGCCCTTCATTAACAGCAATCCTGCGGTTCCTCTGCCTACCGGTGAAGTTGATTCTGCCACCATACGCCCCATACCCACCTCTGGCCATCCAGGACAGATGATGATTGGGTCATTTGGAGTTGGCATTGCTGTGCACATCTTGGTTTTACTGCTGCTGTGA 678 0.4941 MHFPILFLLLLPSLFKLSHSATILVDGSSEWKNPTVSIGDSIIFKHKQHFNLYIFKNEKAYNLCNITQATLLTNPYTWHPSRPGFFYFTFHDGSLRACKDSEKLAIEVASSATVPEPSPVATPAPSSGGEVPSSPSFPWPFRPHQAASSPGPAPQAQAGSPVTVPLVPDKGGMPFINSNPAVPLPTGEVDSATIRPIPTSGHPGQMMIGSFGVGIAVHILVLLLL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11519g00003 225 MobiDBLite consensus disorder prediction 109 162 - -
Vium11519g00003 225 PANTHER OS04G0422700 PROTEIN 2 223 - -
Vium11519g00003 225 Gene3D - 19 111 IPR008972 -
Vium11519g00003 225 SUPERFAMILY Cupredoxins 20 108 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11519g00003 Vium-Chr11519 31238 33986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11519g00003 5 153 Phytocyanin Superfamily AT4G28365 26.286 1.41e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11519g00003 - - gmx:100800621 362.459