Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11467g00001 ACACAGGGATGCAAGAGACCCACGGGAAGTGAGATTGGAGGCACTCCACCCAACATAAGCGCGTGTTCCTCGATTCAGCCAAGTCCACAATCTTCGTCATTCCCGAGTCCAGTGCCTTCCTACCACGCTAGTCCAACCTCTTCCTCCTTCCCTAGCCTCACTCGCATTGACGCAAACCCCTCTTCCTTTCTCATCCCATTCATCCGCAACATAACTTCAATCCCCGCCAACCTTCCCCCTCTCAGGATATCCAACATCGCCCCTGTCACCCCACCTCTTTCCTTTCCCCGAACCTCCAAGCTTAAGGCTGACTTCGATTCCCTCTCCAACGCTTCCTTCCGCCACCCTCTTTTCGCCACCTCCGCCCCCTCCAGTCCCTCGCGCCGCCACCACGTCGCGACTTCCACCATCCCCGAGTGCGACGAGTCCGACGCTTCCACCGTCGACTCTGCCTCCGGCCGTTGGGTTAGTTTTCACGGTCAGACCCCCGCCGGTCCCCCTTCCCCTACTTTCAACCTCATGAAACCCGCTATGCACCAGATCGCTCCTCAGGAGGGCGTACACTGGGGTTCCGTTGCGGAGATAGGCAGAGGAGTCTCCGATTTTGAATTCGAGAATGGCAGAGTAAAGCCTTGGGAGGGTGAGAGAATACACGAGGTGGGAATGGATGATTTGGACCTTACTCTCGGATTCGGAAAAGCTTGA 705 0.5688 TQGCKRPTGSEIGGTPPNISACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSLTRIDANPSSFLIPFIRNITSIPANLPPLRISNIAPVTPPLSFPRTSKLKADFDSLSNASFRHPLFATSAPSSPSRRHHVATSTIPECDESDASTVDSASGRWVSFHGQTPAGPPSPTFNLMKPAMHQIAPQEGVHWGSVAEIGRGVSDFEFENGRVKPWEGERIHEVGMDDLDLTLGFGKA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11467g00001 234 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 3 230 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vium11467g00001 234 MobiDBLite consensus disorder prediction 1 50 - -
Vium11467g00001 234 MobiDBLite consensus disorder prediction 119 147 - -
Vium11467g00001 234 Pfam BES1/BZR1 plant transcription factor, N-terminal 2 58 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11467g00001 Vium-Chr11467 4 1038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11467g00001 2 234 BZR Transcription Factor Family AT1G75080 50.980 8.51e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vium11467g00001 BES1_N 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11467g00001 K14503 - gmx:100795837 373.244