Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11430g00001 ATGGATGTGGATACATTGTTTGCTTCAATTAATCAGATCAATGTTTCTGATCATACTGCAAAATGTGGTGTTTGCCTTAAAACTCCACCCAATATCGCATCAGATGGCCTATGGGGAAAACATAGCACAGAAGGGTCTCCTTTAAAGTCATCTATGCCAATATTTCTACTCCAAGTGGTTTTGATTTACACTGTAACACGAACTTTGAATTACCCTTTAAAGAAGCTGGGTTTTCCTGCCATTTTTTCACAATTGATGGCTGGGCTCATTTTAGGACCATCCTTGAGTATATTGGAGAAAGAGAAGACAATGTTGTTTCCTTATGGAAGTCAAGATACACTTGCTACTATATCATCACTTGGTTATATGCTATTTGTCTTTGAGAATGGTGTGAAAATGGATTTCAGCATGATCACCAGAACAGGAAGACAAGGATGGATTATTGCCATTGTGGGGTTGCTATTTCCTCTACTAATTGGTTATTCATCTGTAGAACACATTTCTAAACATACATCCGAGGGTACAATAGTGCATTCAACTATTGTTATATTGATTACACAGAACATGACTTCCTTTACAGTGATTGCATCCGTCCTCAATGACCTTCAAATCCTAAACTCTGAACTTGGAAGATTGACGTTATCTTCTGCACTGGTGGGTGACATGCTGAGTAATATTCTTGTAATTGCATCTGCAGCCTTTGATACCAGGAAAGTGAATGCAAATAGTATAAATTTGGTGTTGCTTTTCGCTATAATAATCATCATTTTCTTTGTCTATCGGCCTGCAATGTTCTTGGTGATTGAGCACACACCAGAAAGCCAAGAAGTGAAGGATATTTACATTAACGTTATCATTGGGGTTCTCTTTGTTTTGGGTTGGTGTTCAATGCTCTTCAATATAGAATTCATTCTTCTACCTTTCCTTTATGGATTGGCTACACCAGATGGACCTCCATTAGGATCTTCATTAGTTAAAAGGGTTCATACTTTTGGTTTAGAATTTCTCATGCCAATCTTCGTCACTACATGTGCAATGAAGATGAATTATTCCTTGGTAGAATTCACATCACCTATATTTATAGGCACCGTCCTTATGATCATTACTGGTCATCTAATGAAACTTATATCTTACGTAGCATCTGCACTCTATTTCAAGCTATCACTAAAGGATGCACTTTCTCTTGCCCTCCTTCTAGATTGCAAAGGCATTGTGGAAGTAGCCATGTATAGCTCTGCATTGGACAAAAGGGACATCCAACCTATACGTTATACTGTGGCTCTAACAATGATCATGATCTCAAATAGCGTTGTGCAATTGCTGGTGAAACGTTTGTATGACCCTTCAAGAAAATATTTTGGCTACCAGAAAAGGAACATGTCTGATTTGAAATTTGACTCCAATCTCCGGATCCTAGTTTGTATTCATAAAAATCATCACACAGTACCTATAATATCATCTCTTGATCTATTTAATCCTACACCACTGTATCCAACAACTGTGGATGTTCTTCATCTGATTGAACTAGTAGGGCGTTCTAGTCCTATTTTCATTTCTCACAAGATGAAAAGAGGTGTTCCTTCTTTTGCAAGAAACTCCTACTCGGAGAATGTCATCCTTTCCTTCAAACTCCATGAAGATGAAAAGCTAGGTGCAACAACAATATACCCTTATACAGCCATATCTCCACCTACACTGATGCATGAAGACGTGTGCTACCTTGCATTGGATAAAGTTGCATCAATCATCATTCTTCCTTTTCATCGAAGATGGTCTTTTGATGGAAAAATTGAACACGAGGACAAGACTGTGAGGTTGCTGAGTTGTAAGGTCATGGATAAGGCTCCATGCTCGGTTGGAATATTAGTGACTCGTTTTGTTCGTAAAAGTGATTCACCACTTCGATTAGCCATGATCTTTTTCGGTGGTGATGATGATAGAGAGGCTTTGTGCTTGGCCAATAGAGCAGCCAAAGACACTGCTAATGTTAACCTTGTGGTATATCACATTACAACAAGCGAAAGCAAGGATGAAAAACATAACGAGGACATTATGCTTGATCGTACAATATTAAAAAATGCTAAAAGAGAATGTTCTCGTATGAAAAATGTTGTGTATGAGGAAATAACAGTGGAGGGTGGTGCCCAAGTAGCTTCTCTTCTTCATCGTATGGCAGAAGATCATGACTTTTTTATAGTTGGGAGACGCCATGGTATTGATTGTCCTCAAACAAAAAGTCTTCAAGAATGGAGTGAGTTTCCAGAGTTAGGTGTCATAGGTGATTTTCTTGCTTCTCCAGATCTTGATTGCAGATCATCTGTTTTGGTAGTGCAACAACAAAAATTTTACCATTAA 2355 0.3822 MDVDTLFASINQINVSDHTAKCGVCLKTPPNIASDGLWGKHSTEGSPLKSSMPIFLLQVVLIYTVTRTLNYPLKKLGFPAIFSQLMAGLILGPSLSILEKEKTMLFPYGSQDTLATISSLGYMLFVFENGVKMDFSMITRTGRQGWIIAIVGLLFPLLIGYSSVEHISKHTSEGTIVHSTIVILITQNMTSFTVIASVLNDLQILNSELGRLTLSSALVGDMLSNILVIASAAFDTRKVNANSINLVLLFAIIIIIFFVYRPAMFLVIEHTPESQEVKDIYINVIIGVLFVLGWCSMLFNIEFILLPFLYGLATPDGPPLGSSLVKRVHTFGLEFLMPIFVTTCAMKMNYSLVEFTSPIFIGTVLMIITGHLMKLISYVASALYFKLSLKDALSLALLLDCKGIVEVAMYSSALDKRDIQPIRYTVALTMIMISNSVVQLLVKRLYDPSRKYFGYQKRNMSDLKFDSNLRILVCIHKNHHTVPIISSLDLFNPTPLYPTTVDVLHLIELVGRSSPIFISHKMKRGVPSFARNSYSENVILSFKLHEDEKLGATTIYPYTAISPPTLMHEDVCYLALDKVASIIILPFHRRWSFDGKIEHEDKTVRLLSCKVMDKAPCSVGILVTRFVRKSDSPLRLAMIFFGGDDDREALCLANRAAKDTANVNLVVYHITTSESKDEKHNEDIMLDRTILKNAKRECSRMKNVVYEEITVEGGAQVASLLHRMAEDHDFFIVGRRHGIDCPQTKSLQEWSEFPELGVIGDFLASPDLDCRSSVLVVQQQKFYH 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11430g00001 784 PANTHER CATION/H + ANTIPORTER 32 781 - -
Vium11430g00001 784 Gene3D - 53 452 IPR038770 -
Vium11430g00001 784 Pfam Sodium/hydrogen exchanger family 59 435 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11430g00001 Vium-Chr11430 3236 5874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11430g00001 24 781 Antiporter Super Family AT5G22900 34.240 3.56e-145 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11430g00001 K26731 - gmx:100784321 1003.43