Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11395g00006 ATGGACGATGAGGAAGAGATCCAGTCGCATCCGTCGCCGGCGAGCGGATCCCCGGTGTCTTCTCCGAGGGCGAACGGACGGATAACGGTGACTGTCGCGGCGCCGGCGCCGTCGAATAGTTTGGCATTAGCGCTTCCGATTCAGCAGCCGTCGAAGGGCAACGGTGGTGGAGGAGGCGGCGGAGGAAGGGAGGATTGCTGGAGCGAAGGTGCGACGGCGGTACTGATCGACGCGTGGGGAGAGAGGTATCTGGAACTGAGCAGAGGAAATCTGAAACAGAAGCACTGGAAGGAGGTGGCTGATATCGTGAGCGGCAGAGAAGATTACACGAAGGCGCCGAAGACAGATATTCAGTGCAAAAACCGGATCGACACCGTAAAGAAGAAGTACAAATCGGAGAAGGCTAAGATCGCCGCCGGCGCCACCAGCAAGTGGCCGTTCTTCGACCGTTTGGACAAATTAATCGGTCCAAGCGCCAAGATCCCCGGCGCCGGAGCCTCCTCCGGTACCGCCGGCACCAGCGCTGCCGGAAACAGTATTTTACAGTCGCACAAAGTGCCGTTAGGGATTCCGGTCGGCGTTCGCGACGGCGTGAATCAGTATCACCGTCCTCAAAGGCCGGCGCAGCAACAACAACCGCAGCCGGTTCCGTTGAAGAACCAGAAGATTCAGTTCCGGCGCCGCGGTCCACCGTTGGAATCAGATTCGGACGAGCGTGGCGCGTCATCGCCAGCTTCGAGCGACAGTTTTCCCCCGGAGAGTTTCGAGCGGAAGAGGCCGCGGGTGATGAGTTCGAACGCAGGGAAAGGAAGCGAAGGAAGACGGAGGGCGAAGGGTTGGGGAAGCGCGGTGAGGGAACTGACGCAGGCGATTCTGAAATTTGGCGAGGCGTATGAACACGCGGAGAGCTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTCGCGAAGGATTTGGAGTTGCAGAGGATGCAGTTTTTCATGAAGACACAACTGGAGATTTCGCAACTCAAGCTTGGAAGAAAAGGTGCTAATCCTGGCAACAATCACCATAGCACCACGAACAATAACAATAACAACAATCATAACAACAATAATAGCGACAGCGAGTGA 1125 0.568 MDDEEEIQSHPSPASGSPVSSPRANGRITVTVAAPAPSNSLALALPIQQPSKGNGGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSGREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFFDRLDKLIGPSAKIPGAGASSGTAGTSAAGNSILQSHKVPLGIPVGVRDGVNQYHRPQRPAQQQQPQPVPLKNQKIQFRRRGPPLESDSDERGASSPASSDSFPPESFERKRPRVMSSNAGKGSEGRRRAKGWGSAVRELTQAILKFGEAYEHAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKLGRKGANPGNNHHSTTNNNNNNNHNNNNSDSE 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11395g00006 374 FunFam trihelix transcription factor ASIL2 67 132 - -
Vium11395g00006 374 MobiDBLite consensus disorder prediction 350 374 - -
Vium11395g00006 374 MobiDBLite consensus disorder prediction 45 65 - -
Vium11395g00006 374 MobiDBLite consensus disorder prediction 10 28 - -
Vium11395g00006 374 MobiDBLite consensus disorder prediction 158 282 - -
Vium11395g00006 374 MobiDBLite consensus disorder prediction 1 28 - -
Vium11395g00006 374 MobiDBLite consensus disorder prediction 167 181 - -
Vium11395g00006 374 MobiDBLite consensus disorder prediction 203 219 - -
Vium11395g00006 374 Pfam Myb/SANT-like DNA-binding domain 64 154 IPR044822 -
Vium11395g00006 374 MobiDBLite consensus disorder prediction 342 374 - -
Vium11395g00006 374 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 34 343 IPR044823 -
Vium11395g00006 374 Gene3D - 67 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11395g00006 Vium-Chr11395 21116 23096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11395g00006 1 355 Trihelix Transcription Factor Family AT3G14180 47.926 2.30e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vium11395g00006 Myb_DNA-bind_4 7.3e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11395g00006 - - gmx:100812599 531.946