Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11367g00002 ATGTTCAGATCAGCTCAAACCGCTTCAAAACCTTCCAAATCCACCATCAAATTCCTCTGCAGTTACGGTGGCAGAATCCTCCCTCGTTACCCTGACGGCAAGCTCCGCTACCTCGGAGGCCACACCCGCGTCCTCGCCGTCGACCGCTCTATTACCTTCTCCGAGCTGCTGCTGAAGCTGGAAGAGCTCTGCGGTGCCTCCGTGAGGCACCTCCGCTGCCAATTACCCTCCGAAGACCTCGACGCTCTTATCTCCATCACCTCCGACGAAGATCTCGCCAATCTCATCGAGGAATACGACCGCGTTTCATCGCTCAAGATCAGAGCCTTCCTCTCGCCGCCCACGCCGTCGAGATCTCCGAACAACGCTTCCATTCCTCCCTCGAAGTCGGCTTCATTATCTTCCTCCTCAGCCTCATCGTCGTCGTCATCTTCGTCGTATTGCAGCCTTACCGGCAAATCTGGTCGGAGTTACAGAACCTCGGCGACGGTGGTCGACCGTTGCGTCCATCAGATGTCGCCGGCTCCGGCGTACCGGACCGCAGTGGACAAATCCAAACCATCCGGGAGGAATATTCCTCTCCCGCGCTACGGTTACCACGGGAGCGGTGGCCAGGTTTACCTGATCCACCACGGAAACCACTGGCAATAA 651 0.5745 MFRSAQTASKPSKSTIKFLCSYGGRILPRYPDGKLRYLGGHTRVLAVDRSITFSELLLKLEELCGASVRHLRCQLPSEDLDALISITSDEDLANLIEEYDRVSSLKIRAFLSPPTPSRSPNNASIPPSKSASLSSSSASSSSSSSSYCSLTGKSGRSYRTSATVVDRCVHQMSPAPAYRTAVDKSKPSGRNIPLPRYGYHGSGGQVYLIHHGNHWQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11367g00002 216 MobiDBLite consensus disorder prediction 114 155 - -
Vium11367g00002 216 PANTHER OS05G0427100 PROTEIN-RELATED 9 186 - -
Vium11367g00002 216 Gene3D - 34 112 - -
Vium11367g00002 216 Pfam PB1 domain 32 113 IPR000270 GO:0005515
Vium11367g00002 216 SMART PB1_new 30 114 IPR000270 GO:0005515
Vium11367g00002 216 SUPERFAMILY CAD & PB1 domains 32 120 - -
Vium11367g00002 216 MobiDBLite consensus disorder prediction 113 155 - -
Vium11367g00002 216 CDD PB1_UP2 19 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11367g00002 Vium-Chr11367 18313 21064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11367g00002 16 111 MAP Kinase Kinase Kinase AT5G57610 51.485 1.49e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11367g00002 - - gmx:100810685 314.309