Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11356g00004 ATGGGTAAAAACTTTAGGCTTTTGGATGATCTTCATGTTCACATTCTTGCTTCTCGTGAATCCAGTTCAGGAAGGGATACCATTCGCATGGAATACCTTACTCTTATTCTTAAACGACTGACTGAACCCCTACGAACCCTTCCTAAGGCTGAAGCGGTTCAACAAGTTGTGGAATTCATGAATACATACTCTATCAGTCAGGAAGATTTTGATACTATAGTAGAGTTATCAAAATTCAAGGGTCAATCTAATCCACTAGATGGGATCCAGCCTGCTGTTAAGTCAGCTTTGACAAAAGCCTATAAAGAGCAAAGCAGATCTCGGGTGGTTCGAGTTGCCGACCAAATCACACTTCCCGGTGTAAAGAAGGCCCCTAAGAAGCGGATTGCTGCTATACTTGAACCAGCCGAGGAAGGAGGCAAAAATGAAGATGACACCTTGGACGAGAGTGAAGAAGAGAACACCTCTGATACAGAAGAGTTGGAAGGCATCACCAAGGGAGAGAAGCTGCAATCAGAACTTCAAAGCTTGAATTCAAAAGCCACGCAAGTGCAGTTGGAACTGAAGGGAACGGGTAATTCGAGTTCCAAGAAGGCATCGGCTGGTAGAGGTAAAGGTGCTTCCGCATCTGGGAAAAAGGTTGCTCAAGCTCCAAAAAGAAAAAGGTGA 669 0.4439 MGKNFRLLDDLHVHILASRESSSGRDTIRMEYLTLILKRLTEPLRTLPKAEAVQQVVEFMNTYSISQEDFDTIVELSKFKGQSNPLDGIQPAVKSALTKAYKEQSRSRVVRVADQITLPGVKKAPKKRIAAILEPAEEGGKNEDDTLDESEEENTSDTEELEGITKGEKLQSELQSLNSKATQVQLELKGTGNSSSKKASAGRGKGASASGKKVAQAPKRKR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11356g00004 222 MobiDBLite consensus disorder prediction 141 158 - -
Vium11356g00004 222 Coils Coil 167 187 - -
Vium11356g00004 222 PANTHER CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 2 198 - -
Vium11356g00004 222 MobiDBLite consensus disorder prediction 132 222 - -
Vium11356g00004 222 MobiDBLite consensus disorder prediction 169 201 - -
Vium11356g00004 222 Pfam Replication factor RFC1 C terminal domain 2 102 IPR013725 GO:0003689|GO:0005524|GO:0005663|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11356g00004 Vium-Chr11356 10305 12114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11356g00004 2 184 Core DNA Replication Machinery Family AT5G22010 61.622 1.42e-72 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11356g00004 K10754 - vum:124820555 363.229