Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11356g00002 ATGGCAAAGAGGTTGATGGATGTTGCAAAGTCTGAAGGGCTTCAAGTCAATGAGATTGCTCTTGAGGAACTAGCAGAAAGAGTTAATGGAGATATGCGGATGGCAGTAAATCAGTTACAGTATATGAGCCTCTCTATGTCAATTATCAACTATGACGACATTAGACAACGGCTTTCTTACCAATGCAAGGATGAAGACATTTCCACCATCACGGCTGTTGATAAGTATAATATATAA 237 0.3924 MAKRLMDVAKSEGLQVNEIALEELAERVNGDMRMAVNQLQYMSLSMSIINYDDIRQRLSYQCKDEDISTITAVDKYNI 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11356g00002 78 Gene3D - 1 67 - -
Vium11356g00002 78 CDD HLD_clamp_RFC 1 54 - -
Vium11356g00002 78 FunFam Replication factor C subunit 1 1 67 - -
Vium11356g00002 78 PANTHER CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 1 75 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11356g00002 1 75 Core DNA Replication Machinery Family AT5G22010 80.000 3.12e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11356g00002 K10754 - vum:124820560 152.91