Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11353g00004 ATGGAACAGTTCTATCTCTCCCTTCCCCTGTTTGTGTCTATCATCCCTCTCTCATTTCTCTTCCTTTTCTACAGGCATAATGCTCAGTCCCTCGTCCCCAACTTGCCACCGGGAAATATGGGGTTTCCGGTGGTCGGCGAGAGCATTGAGTTTCTATCATTATGGTGGAAAGGGAATCCAGAGAAGTTCATATACGAACGCATGGCAAAGTACTCTTCCAAAGTGTTCAAGACCTCTATCTTTGGCGAGAATACAGTCATGGTCTGTGGAGCCGCATGCAACAAGTTCTTGTTCTCTAACGAAAACAAACTGGTCATGTCTTGGTGGCCAGACAACGTCAACAAGATATTCCCAGCGGCGCTGGAAAACTCTAAGCTGGAAGCCAAGAAACTGAGGAACATACTCCCTCAGTTCCTCAGCGCCCAAGCCCTCCAACGTTACATTAGCGTCATGGACACCGTTGCCCAAAGACACTTTGCTTTGGATTGGGAGAACAACACCTGTGTTACCGTGTTCCCCTTGGCCAAAAGGTATACCTTCTGGGTGGCTTGCCGTCTGTTCGTGAACGTTGAAGATCCTATCCATGTGACAAAATTGTTGGAGTCTTTCAGTAGAATAGCCCCAGGAATCATGTCGGTGCCCATTGACTTGCCTGGAACTCCGTTCAACAAAGCCATCAAGGCCTCCGAGTTCGTTAGGGAGAAGCTATTGAAGATCATCATACAGAGGAGAAAGGACCTGGCTAATGGAACAGCCTCACTAAATCAAGACATTTTGTCACACATGTTATCATCATGCGATGAGAATGGACAATATTTGAATGACCAATTTATTGCTAACAAGATCCTTGGCCTGTTGGTAGGAGGCCACGACACTGCAAGTTCTGTGTGCACTTTTGTCGTCAAATACCTTGCTGAGCTCCCTCCCAATATTTATGAAAATGTCTATCAGGAACAAATGGAGATAGCAAAAGGGAAAGCTGCGGGAGAATTGTTGAATTGGGATGACATCCAGAAGATGAAATATTCGTGGAATGTTGCTTGTGAAGTAATGAGACTGGCGCCTCCACTCCAGGGTGCTTTCAGGGAAGCCATGGATGACTTTGTGTTAAATGGATTCTCAATTCCAAAAGGCTGGAAGTTGTATTGGACAGCAAGTTCAACACACAAGAATCCAGAGTGCTTCGCAGAACCAGAGAAGTTTGATCCGAGTAGATTTGAAGGAACAGGACCAGCTCCTTATACTTATGTACCATTTGGAGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCTCGAATGGAAATATTGGTGTTCATGCACAACTTGGTCAAAAGGTTCAAATGGGAAGCCATTAATCCTAATGAGAAAATTATTATAGATCCCATGCCCGTTCCTGCAAAAGGCCTTCCTGTTCGTCTTTATCCTCACCAACCTTGA 1440 0.4562 MEQFYLSLLXLFVSIIPLSFLFLFYRHNAQSLVPNLPPGNMGFPVVGESIEFLSLWWKGNPEKFIYERMAKYSSKVFKTSIFGENTVMVCGAACNKFLFSNENKLVMSWWPDNVNKIFPAALENSKLEAKKLRNILPQFLSAQALQRYISVMDTVAQRHFALDWENNTCVTVFPLAKRYTFWVACRLFVNVEDPIHVTKLLESFSRIAPGIMSVPIDLPGTPFNKAIKASEFVREKLLKIIIQRRKDLANGTASLNQDILSHMLSSCDENGQYLNDQFIANKILGLLVGGHDTASSVCTFVVKYLAELPPNIYENVYQEQMEIAKGKAAGELLNWDDIQKMKYSWNVACEVMRLAPPLQGAFREAMDDFVLNGFSIPKGWKLYWTASSTHKNPECFAEPEKFDPSRFEGTGPAPYTYVPFGGGPRMCPGKEYARMEILVFMHNLVKRFKWEAINPNEKIIIDPMPVPAKGLPVRLYPHQP 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11353g00004 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Vium11353g00004 480 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11353g00004 480 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11353g00004 480 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11353g00004 480 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11353g00004 480 Pfam Cytochrome P450 37 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11353g00004 480 Gene3D Cytochrome P450 26 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11353g00004 480 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11353g00004 480 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11353g00004 480 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11353g00004 480 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11353g00004 480 SUPERFAMILY Cytochrome P450 33 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11353g00004 480 PANTHER CYTOCHROME P450 26 32 467 - -
Vium11353g00004 480 CDD CYP90-like 68 477 - -
Vium11353g00004 480 FunFam Taxadiene 5-alpha hydroxylase 27 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11353g00004 Vium-Chr11353 21627 23898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11353g00004 26 382 Cytochrome P450 AT5G36110 56.233 2.80e-138 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11353g00004 K20667 - cave:132184488 741.495