Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11314g00001 TTTCGTCAAGGTAAACAGCCTCCCACAGTTGCAGGAGCATGGCCAATACTTGGTCATCTTCCACTGTTGAATGGTCCAAACACACCCCACAAAACTTTGGGTGCTTTGGCTGAAAAATATGGACCCATCTTCACCATCCAACTTGGTTCCAAAAAGGCTGTGGTAATCAACAACTGGGAAATAGCAAAGGAATGCTTCACCACAAACGACACGGTGGTTTCCTCTCGCCCCAAACTTGTCGCCGTTGAACTCATGGGCTATAACCATGCCATGTTTGGCTTTGCACCCTATGGTCCCTATTGGCGCGAGCTTCGAAAGATTACAACTTTAGAGATCCTTTCCGCTCGTCGAGTGGAACAACTGCAGCATGTTCGTGTCTCCGAAGTTCAAAACTCGATCAGAGAGTTGTATACTCTATGGTGTAGTCAAAAGGGTGAGTCTGGCTATGCCTCGGTTGAGCTGAAGCAATGGTTTTCTCACTTGACATTCAACATGGTTCTTAGAATGCTCGTTGGGAAGAGATATTTTGGTGGTGACAACGTGGACGATGAGAAGGCACAGAGATGTGTGAAGGCTGTGGAGGAATTCCTGCATCTGTTGGGTGTGTTCGCAGTGGGAGATGTTATTCCTTGGTTGAGATGGCTTGATTTTGGAGGCCATGAGAAGGCAATGAAAGAAACCGCCAAAGATTTGGATATTCTATTATATGAGTGGTTAGAGGAACATAGACAAAAGAAGGGTTTCGATAAAAAGGTTGATGAAGTTCAAGATTTCATGGATCTGATGATTTCCTTGCTTGATGAAAGAACTATTGATGGTTTTGATGCAGATACCGTTATCAAATCCACTATCCTGGCACTTATTGCGGGAGGAAGTGGTACAAGTAATATTATTCTTACATGGACAATATATTCAATTTTGAGAAATCCTTTTGTAATGGAAAAAGTAAAAGCCGAACTAGACATTCATGTTGGAAAAGAGAAAATGGTAAGTGAGGATGATATAAGTAAGTTAAAATATCTTCAAGCCACAGTCAAAGAAACTTTAAGATTGTATCCTCCTCTTCCTCTATTGGCACCTCGTGAATTCACAGAGAATTGCACTTTAAGTGGTTATAACGTAGAAAAAGGAACTCGTTTAATCACAAATATTTGGAAGATTCAGACAGATAGTAATGTTTGGGAAGATCCATTGGACTTCAAACCAGAAAGGTTTCTAACAACTCATAAAGACATTGACATCAGAGGTCATAATTTTGAGTTATTGCCATTTGGAAGTGGTAGAAGAAAGTGTCCTGGAATAACCTTTGGCCTTCAAATGGTGCATTTCAATCTTGCTACTCTTTTGCATTCTTTTGAAATTCTAAGTTCATCACCTGATCTTATTGATATTACTGAAACCTCTGAATTAATCGACACCAGTGTTATTCCCCTTGAGATTCTTATTAAACCATGTCTATCTTTTAGCTGTTATGAGAACAACTTATCCTTATGTTAA 1497 0.4015 FRQGKQPPTVAGAWPILGHLPLLNGPNTPHKTLGALAEKYGPIFTIQLGSKKAVVINNWEIAKECFTTNDTVVSSRPKLVAVELMGYNHAMFGFAPYGPYWRELRKITTLEILSARRVEQLQHVRVSEVQNSIRELYTLWCSQKGESGYASVELKQWFSHLTFNMVLRMLVGKRYFGGDNVDDEKAQRCVKAVEEFLHLLGVFAVGDVIPWLRWLDFGGHEKAMKETAKDLDILLYEWLEEHRQKKGFDKKVDEVQDFMDLMISLLDERTIDGFDADTVIKSTILALIAGGSGTSNIILTWTIYSILRNPFVMEKVKAELDIHVGKEKMVSEDDISKLKYLQATVKETLRLYPPLPLLAPREFTENCTLSGYNVEKGTRLITNIWKIQTDSNVWEDPLDFKPERFLTTHKDIDIRGHNFELLPFGSGRRKCPGITFGLQMVHFNLATLLHSFEILSSSPDLIDITETSELIDTSVIPLEILIKPCLSFSCYENNLSLC 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11314g00001 498 PRINTS E-class P450 group I signature 37 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PRINTS E-class P450 group I signature 61 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PRINTS E-class P450 group I signature 161 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 Gene3D Cytochrome P450 2 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 PANTHER CYTOCHROME P450 82C3-RELATED 4 491 - -
Vium11314g00001 498 Pfam Cytochrome P450 11 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 FunFam Cytochrome P450 82C4 1 483 - -
Vium11314g00001 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Vium11314g00001 498 SUPERFAMILY Cytochrome P450 8 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium11314g00001 498 CDD CYP82 41 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11314g00001 Vium-Chr11314 4 2211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11314g00001 8 484 Cytochrome P450 AT4G31940 48.866 3.18e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11314g00001 - - vum:124820532 1008.44