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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vium11188g00006
ATGGGAACACAACCCCGGCAAACATTTCGAGAGGAGGAGGAGGAGGAGCTGCCATGCCGTGGAACTATCTCAGGTCAATCAATGTCAACTAGCAGAAGTGTTGGGTCACCATCCAGCCGGAGTGAGCAGACAATGGCAACACCAGCTAGTGATAACACCTTTCTGAGGTTAAATAATCTTGACATACATGGTGATGACGCTGGATCACAGGGTGCAGTTGCCAAGAAGAAAAAGAGGGGCCAACGCACTGTTGGTGGTGACAAGAGTGGAAGAGGTCTCCGCCAATTTAGTATGAAAGTCTGTGAGAAGGTAGAAAGCAAGGGGAGAACAACTTACAATGAGGTAGCTGATGAACTTGTAGCTGAATTTGCTGATCTAAGCAATGGTGCTTCAACTCCTGATCAGCAACAATATGACGAGAAAAACATCCGTCGGAGGGTGTATGATGCTTTGAATGTTCTAATGGCAATGGATATTATTTCTAAGGATAAAAAGGAAATACAATGGAAGGGTCTTCCTCGCACAAGTCTAAGCGATATTGAAGATCTAAAGAATGAACGTCTTGGGCTAAGGAATAGAATTGAAAAGAAAGCATCCTATTTGCAAGAACTGGAGGATCAATACATAGGTCTCCAGAAACTTATAGAACGAAATGAGCAATTATATAGCTCCGGGAATGCTCCCAATGGAGGTGTATCTTTACCCTTCATTCTGGTGCAGACACGCCCCCACGCAACTGTTGAAGTAGAAATATCAGAAGATATGCAGCTTGTGCATTTTGATTTCAATAGCACTCCCTTTGAGCTGCATGATGATAACTATGTTCTCAAGGCAATGAAATTTTGTGAGAGATCTCAGAATGACAACAAACCAGACAATCCTCCAGATGGCGGGGAAGGTTCTAGTATGTCTAGTTTGTATCATGCACAGATTCCTAGTTCAGTTTCAAACCCTCCTGCGAGACCTCCTTCATCTCCACCACTCCCTGGAATATTGAAGGCAAGAGTTAAGAACGAGCATTGA
1023
0.4379
MGTQPRQTFREEEEEELPCRGTISGQSMSTSRSVGSPSSRSEQTMATPASDNTFLRLNNLDIHGDDAGSQGAVAKKKKRGQRTVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADLSNGASTPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLSDIEDLKNERLGLRNRIEKKASYLQELEDQYIGLQKLIERNEQLYSSGNAPNGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERSQNDNKPDNPPDGGEGSSMSSLYHAQIPSSVSNPPARPPSSPPLPGILKARVKNEH
340
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vium11188g00006
340
MobiDBLite
consensus disorder prediction
285
340
-
-
Vium11188g00006
340
SUPERFAMILY
E2F-DP heterodimerization region
178
292
IPR037241
-
Vium11188g00006
340
MobiDBLite
consensus disorder prediction
1
91
-
-
Vium11188g00006
340
PIRSF
Txn_factor_DP
4
340
IPR015648
GO:0005667|GO:0051726
Vium11188g00006
340
SMART
DP_2
178
338
IPR014889
-
Vium11188g00006
340
CDD
DP_DD
176
279
IPR014889
-
Vium11188g00006
340
FunFam
Transcription factor-like protein DPB
177
301
-
-
Vium11188g00006
340
Gene3D
-
83
176
IPR036388
-
Vium11188g00006
340
MobiDBLite
consensus disorder prediction
298
315
-
-
Vium11188g00006
340
FunFam
Transcription factor-like protein DPB
83
176
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vium11188g00006
Vium-Chr11188
20486
26037
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vium11188g00006
78
287
E2F-DP Transcription Factor Family
AT5G02470
53.774
1.53e-78
240
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
E2F-DP
Vium11188g00006
DP
2.4e-41
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vium11188g00006
K04683
-
gmx:100797603
565.074
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