Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11082g00002 ATGCGTTCGGCTCGACTGGAAAAACCTGCAGGTTTTTATAATGTGCCATTTTCTTTGAAAACTTCTAGCTTAACTAAAATAAAAATATTACTTGTTTCCATTTATAGCTATTTCATTGTTTTATTTTCTTCTCTAATATTTGATCCAAAAACTGTCTTCCTGAAGGTTTTGGAGTGGCTAAAAGTCCTGAATCTTAGTCACTCCAAGTACTTAACAGAAACTCCTGACTTTTCGAGACTTCCAAGTCTTGAAGAACTCATTCTCAAAGATTGCCCTAGATTGCGCAAATTACACCAATCTATTGGAAGTCTTTCCAATCTTACACTGCTAAATTTGAAGGACTGCACAAGTCTAAGCAATCTCCCGAGAAAGATATATATGTTGAAATCTTTAAAAACTCTCATTCTCGCTGGTTGTTCGAAGATTTACCTATTGGAAAAAGATATAGTCCAAATGGAATCCTTGATATCTCTAATTGCTGAAAATAAAGCCGTTAAACAAGTGCCTTTTTCAATTGTAAGCTCAAGAAGCATTGGATATATATCCTTACATCGACTTGAGGGACTGTCACATAATGCTTTTCATTTTATCATTCGGTCTCGGATGTCACCAACAATCAATCCCCTATCTTATATTCATTCATTCACGGATATGGAGGATAATTTTTGGGATGTTATTGGACCATTCTTTAGCAGCTTTGTAAATCTTCGAAGCGTTTTCGTTCAGTGTGACCCCGAGTTTCAACTATCTCAGCAAGTGAAAACTATTCTGGTCGAATATGGCGTGAATATTACAGAATCAAGAATTTCAAAGCATTGCTTCAGGTCTTCTTTGGTTGGTGTTGGAAGATACAATGAATTCTTAAATACTGTATTGGAAAGCAGTGAGTCAGGTGATGTTTCTCTTCCAGGTGACAACGATCCTTATTGGTTGGCCCATATAGGTGAGGGACATTCTGTTTCTTTCACTGTACCTCAAGATCGTGTCATGAAGGGAATAGTTTTGTGTGTTGTTTATTTATCAACCCCGTTAATCGTGACAACTGAATGTCTTACAAGTGTCTTAATTGTTAATTACACAAAGTGTACATTACTGATGCACAACCATGGCACAGTAATTTCCTTTAATGATGAAGATTGCATATGA 1146 0.3621 MRSARLEKPAGFYNVPFSLKTSSLTKIKILLVSIYSYFIVLFSSLIFDPKTVFLKVLEWLKVLNLSHSKYLTETPDFSRLPSLEELILKDCPRLRKLHQSIGSLSNLTLLNLKDCTSLSNLPRKIYMLKSLKTLILAGCSKIYLLEKDIVQMESLISLIAENKAVKQVPFSIVSSRSIGYISLHRLEGLSHNAFHFIIRSRMSPTINPLSYIHSFTDMEDNFWDVIGPFFSSFVNLRSVFVQCDPEFQLSQQVKTILVEYGVNITESRISKHCFRSSLVGVGRYNEFLNTVLESSESGDVSLPGDNDPYWLAHIGEGHSVSFTVPQDRVMKGIVLCVVYLSTPLIVTTECLTSVLIVNYTKCTLLMHNHGTVISFNDEDCI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11082g00002 381 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 48 192 - -
Vium11082g00002 381 SUPERFAMILY L domain-like 45 239 - -
Vium11082g00002 381 Gene3D Ribonuclease Inhibitor 5 155 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11082g00002 Vium-Chr11082 6515 8275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11082g00002 57 172 WRKY Transcription Factor Family AT4G12020 35.345 1.45e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11082g00002 - - vun:114167018 457.218