Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium11065g00001 ATGGCGAAAAGTGAGTTAAAGGTGATTGGAAAATGGTCGAGTCCTTATGCTATGCGAGTGAAGATTGCCCTGAACATCAAAGCCCTTGAACATGAGCACTTTGAAGAAACGTTGAACCCCAAAAGCGACCTTCTTCTTCAATCCAACCCTGTCTATGGCAAAGTCCCAGTTCTCCTCCACCATGGCAGACCCATCTCTGAATCTTTGATCATAGTTCAATACATAGATGAAACATGGTCCACTGATCCTCCTATCCTCTCCTCCGATCCTCACGATAGAGCTCTTGCTCGCTTCTGGGCTGCTTACGTAGATGATAAATGGTTTCCATCCATGAAAAGCATTATGACGGTTGAAGGAGAGGAGGAAAGGAAGCCATATTTTGAGGTGTTGGAAGAAGTACTTGAAAGGATGGAGGGTGCTTTCTGGAAATGCAGCAAAGGAAAGCCATTTTTTGCAGGAGACAGGATTGGATTCCTTGACATTGCTTTTGGGTGCTTCCTGGGATGGCTCAGTGTGATAGAACATAGGTATGAAAGGAAACTGCTGGTTGAAGCAAAGGCTCCTGCTTTGGTGAAATGGGCTGAGAGATTTGCTGCTGACCCTGCTGTCAAGGGGCTTATACCTGAGACTGATAAGCTTGTTGAGATTTCCAAGTCTCTTCAGATCAAATGGAGAGCTGCAATTGGCAAGAACTAG 696 0.454 MAKSELKVIGKWSSPYAMRVKIALNIKALEHEHFEETLNPKSDLLLQSNPVYGKVPVLLHHGRPISESLIIVQYIDETWSTDPPILSSDPHDRALARFWAAYVDDKWFPSMKSIMTVEGEEERKPYFEVLEEVLERMEGAFWKCSKGKPFFAGDRIGFLDIAFGCFLGWLSVIEHRYERKLLVEAKAPALVKWAERFAADPAVKGLIPETDKLVEISKSLQIKWRAAIGKN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium11065g00001 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 220 IPR010987 -
Vium11065g00001 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 215 IPR045073 -
Vium11065g00001 231 CDD GST_C_Tau 90 218 IPR045074 GO:0004364|GO:0006749
Vium11065g00001 231 Gene3D - 86 228 - -
Vium11065g00001 231 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Vium11065g00001 231 SFLD Glutathione Transferase (cytosolic) 2 225 IPR040079 -
Vium11065g00001 231 FunFam Glutathione S-transferase GSTU6 1 86 - -
Vium11065g00001 231 SFLD Main.3: Omega- and Tau-like 2 225 IPR045073 -
Vium11065g00001 231 SUPERFAMILY GST C-terminal domain-like 86 218 IPR036282 -
Vium11065g00001 231 CDD GST_N_Tau 6 79 - -
Vium11065g00001 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vium11065g00001 231 FunFam Glutathione S-transferase U9 86 227 - -
Vium11065g00001 231 Pfam Glutathione S-transferase, C-terminal domain 98 201 IPR004046 -
Vium11065g00001 231 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Vium11065g00001 231 Gene3D Glutaredoxin 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium11065g00001 Vium-Chr11065 12826 13782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium11065g00001 1 220 Glutathione S-transferase Gene Family AT1G10370 57.014 2.65e-89 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium11065g00001 K00799 - cam:101508281 374.4