Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10965g00003 ATGGGTGGATTCATCATTCTCTTCCTTTTCTGTGTTCTCATCTTGCAAAGCTCTGTTCTTGAGGTGACCCATGCAAGGTTCCAATCAACAAAGTGTGGAGATGCAGGTCCTGACATCCACTACCCATATCAGATAAAAGATCAGCACCAGCAGTATGAGTCCCTTCCTGGTTTTGAGCTTCTTTGCAAAGATAACCTCACCACCATCCACTTTCCATCTTATGGAGATTTAGAAGTGAAGTCTATCTCCTATGACACCAAAAACATTCACCTCCTTGACCCCAAAAAATGTGTCCATCATGTCTTTCTGAACCTCAATCTCTCCCTCACTCCCTTCCACTACTTTTATGTTCTTAAAAACTATACATACCTCAATTGCTCAACCACCCTTCTACCTCCTTTCGTGGAGATTCCATGTTTAAGTGCTGCTAGTTATCATGTCTACACAGTTGACCCTGCACTACCAGTGCCAGCTTCATGTGCTGGAGTTAAAACCGTTGCCATTCCTTTTGCATATAGCCCTTATCTCTCTGACAGTAAACTCGGTCTTAGATTAACATGGAGCATGCGTGAACCTGAAGACAGAGAAACAACAAACGGTGCTAGAGGTTCCCACACATGGCGTAACATAGGTATTGGGTTCGGCATGTTTGTTTTTGTGATGGCAATGTTATTGCTTATAAGAACAAAGATTAGTGTTGCCGCGAGGAATAACCATCTGAAAGAAGATCAGTTATTGCATATTTAG 747 0.4244 MGGFIILFLFCVLILQSSVLEVTHARFQSTKCGDAGPDIHYPYQIKDQHQQYESLPGFELLCKDNLTTIHFPSYGDLEVKSISYDTKNIHLLDPKKCVHHVFLNLNLSLTPFHYFYVLKNYTYLNCSTTLLPPFVEIPCLSAASYHVYTVDPALPVPASCAGVKTVAIPFAYSPYLSDSKLGLRLTWSMREPEDRETTNGARGSHTWRNIGIGFGMFVFVMAMLLLIRTKISVAARNNHLKEDQLLHI 248
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium10965g00003 248 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 199 IPR046948 -
Vium10965g00003 248 Pfam Wall-associated receptor kinase galacturonan-binding 31 93 IPR025287 GO:0030247
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10965g00003 29 202 C3H Transcription Factor Family AT2G25410 28.261 4.01e-14 69.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10965g00003 - - gmx:100790327 363.999