Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium1092g00007 | ATGAAAATTCAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGAAAGAAATCCGAAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTAGCTATGGAATTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGATTCAAACAAATGAAGGAAATGCATGGTGGTGGTAGTCGAGATGATAGGCAAAAGCGAGAACAACAGCGTCAAGAGAAAGAAATGGCAAAGTTTGCTCAAATTGCTGATGCTCAAAAGCAGCAACGCCTTCAATTGCAACAAGATTCTGGATCAGGAACAGTGTCCTCCGAATCTAGAACTGCCACTGCTCTTACAGATCAGGAGCAGAGAAATACTTTGAAATTTGGGTTTTCGTCTAAAGGCAGTGGTTCCAAGATAACTTTTGGTGCCAAGAAACAAAATGTTGCGAAGAAGCAAAGTGCCCCCCCGATCTCCTCTATATTTAGTAATGATAGCGATGAAGAATAA | 507 | 0.4004 | MKIQVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGGGSRDDRQKREQQRQEKEMAKFAQIADAQKQQRLQLQQDSGSGTVSSESRTATALTDQEQRNTLKFGFSSKGSGSKITFGAKKQNVAKKQSAPPISSIFSNDSDEE | 168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium1092g00007 | 168 | PANTHER | FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED | 2 | 168 | - | - | |
Vium1092g00007 | 168 | MobiDBLite | consensus disorder prediction | 145 | 168 | - | - | |
Vium1092g00007 | 168 | MobiDBLite | consensus disorder prediction | 58 | 85 | - | - | |
Vium1092g00007 | 168 | Pfam | Zinc-finger double-stranded RNA-binding | 24 | 51 | IPR022755 | - | |
Vium1092g00007 | 168 | MobiDBLite | consensus disorder prediction | 58 | 121 | - | - | |
Vium1092g00007 | 168 | MobiDBLite | consensus disorder prediction | 90 | 121 | - | - | |
Vium1092g00007 | 168 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 26 | 48 | IPR013087 | - | |
Vium1092g00007 | 168 | SUPERFAMILY | beta-beta-alpha zinc fingers | 22 | 58 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium1092g00007 | Vium-Chr1092 | 15444 | 16839 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium1092g00007 | 2 | 168 | C2H2 Transcription Factor Family | AT5G26610 | 57.803 | 1.03e-52 | 168 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium1092g00007 | - | - | vum:124824962 | 298.516 |