Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10908g00015 ATGACAAGGGGTTACCCTGCACACCGTTTTGTACAAGCGTACAATGGATGGCAGAAACTCTTCGATCCTTCTACGATCGTGCAAAAACAACAAACTATTGAGCTTACTACGAAGGACAATTCCACAATTTCTTTTCCCATTGTTTGTCATTCACTATTTCATTCTCATTCTATAGGCATATTTTATACTGACAATCCTGTTTCTCACTCCTTCACATTCATATTGTTGAATCTCGCTTTCATCAGCATCATCACACGTTCTATCAGATTTCTTCTTAAGCCCTTAAGACAACCTCTTTTCATATCTCAGTTAATAGGTGGAATCATCATTGGACCTTCCCTTCTGGGGAGAAGTACATGGTACGAAAGTCACATAAAAACCGAGACAACAACGTTCATAATAAACAACCTTGGAATAATGGGATTCGTCTACTTTATTTTCCTTTATGGTGTGAAAATAGATTTAGGTATTCTAAAAAGAACAACGAAAGTGCATATATCTACTGCAATTGTTGGCATTGTAATTCCGACAGCAACAGTGTTGGCTGTGGCACTAGCGATGAGAAAGAACATGGACGAAAATTTGGCAAAGCTTTCGTCACTAGGATCAATTGCGTCATACTTGGGGACATCATCATTCCTTACTATCTACCATATCCTGGAAGAGTTTAACCTTCTAAATTCAGATGCTGGGCGAATATCATTGTCCATAGCAATAATTGGTGACTTATTTGGTTTGTTTATTTTCTTAGCGTTTGATGCAGCACACATGGGAGAATTTGGGATAATGAGCGCGGTCGGGTTTATGTTTTCTCTTGTGTTGATCGTAACGTTCCTTTTATTTTGTGTTCGACCTGCAATGATAAGGATCAACAAGAATACTGCTGAAGGGCACCCAGTGAAAGAATACTTTGTAGTTGTGATGCTTCTAGGGGCTTTTGTTATGGGTTTGGTAACTGATGCAGTGGGCATGGCCGTTGCCACTGGACCATTCTTTTTAGGGTTGGCAATTCCAGATGGGCCTTATGTGGGAGCAACACTTGAAAAGAAAACCTCAGCAATTCTGGGTGATTTCTTTCTACCATTCTCCTTTATTATGGTTGGATCATATACTGATTTCTATTCCATGACTGCTTCTGGTTGGTCCGCTTTATCACCATTGACTACCATGATCATTGTTGGCTACCTTTTGAAATTCTTTACCACTTGGATTAGTTTGCATCTCTTTCGAATGCCATTAAGGGATGGACTGACCGTGAGCCTCATCATGAACTTAAGAGGCCTAACAGAACTTATATTGTTTGTCTATTATATGGAACAAAGCTTCGTAAAGGTGCCGGGCTTCTCATTGTTGATATTTATGACATTATCATTGACAGCAATTTCTTGTCCTTTGATCTCTATATTGTATGATCCAACAAAGCCATACATGGTGAACCAAAGGAGAAACATTCAACATCACCCTCCAGACAAAGAGTTCAGAATAGTGTTATGCATTTTTGAACAGGATGACATACATGGTCTCACTCATCTACTTGATATCTCCAATCCAACCGAAAACATCCCTTTTTCAGTTTCAGTTGTTAGACTGAGTGAGCTCGTAGGTCGAGTCAACCCTTTGTTCATAGACCATGAAAAGCAACAAGTGCCTCCCAATTATCAATGGAGTAGCACCATACACGTGCTTGAACGTCATCAAGAACTCAAAGAACCCTACATGAAGTTTCATTTCTTCACGGCTGTCACCCCAAAAAAGACCATGTTCCGAGACGTATGCGAGCTTGCCCTAGAACAAGAAGCTTCTTTGATCATCTTACCTTTCAACAGGAATGTCCATAACCATATGCAGTCGCAAGTCTTGAACAATGCACCTTGCTCGGTGGCAATTTTCGTTGACAAGGGTCTTCTTAAGACCAGTAACACCTTAGGCAGTTTTCAACGAAGTAAATATCGATTTGCCGTGTTGTTTCTTGGGGGTGGAGATTCTAGAGAGGCTCTTGTTTATGCAGATAAGATGCTTGCTCGCCCTCAGGTGTCTCTCACAGTTATAAGGTTTCTCACTCACAACTTTGTAGGGTACAACGAAATCGAGAAGAAGCTTGATGATGGAATTGTGACTTGGTTCTGGGTTAAGAATGAGGCTAATCAGAAAGTGGTGTATAGAGAAGTGGTGGTTAGAAATGGAGAAGAAACGATCGCAGCGATTCAAGCTATGAATGATGGTGCTTTTGATCTTTTGATAGTGGGAAGGAAACATGGGATAAACCCTATTCTTCTCACTGGTTTATCAGATTGGATTGAAACTGAAGAGTTGGGACTCATAGGAGATTATGTTTCTTCTGCAGATTTTTTTGGCTCGGCTTCTGTCTTAGTTGTTCAACAACAAATCTTAAGAGGCTAA 2400 0.4029 MTRGYPAHRFVQAYNGWQKLFDPSTIVQKQQTIELTTKDNSTISFPIVCHSLFHSHSIGIFYTDNPVSHSFTFILLNLAFISIITRSIRFLLKPLRQPLFISQLIGGIIIGPSLLGRSTWYESHIKTETTTFIINNLGIMGFVYFIFLYGVKIDLGILKRTTKVHISTAIVGIVIPTATVLAVALAMRKNMDENLAKLSSLGSIASYLGTSSFLTIYHILEEFNLLNSDAGRISLSIAIIGDLFGLFIFLAFDAAHMGEFGIMSAVGFMFSLVLIVTFLLFCVRPAMIRINKNTAEGHPVKEYFVVVMLLGAFVMGLVTDAVGMAVATGPFFLGLAIPDGPYVGATLEKKTSAILGDFFLPFSFIMVGSYTDFYSMTASGWSALSPLTTMIIVGYLLKFFTTWISLHLFRMPLRDGLTVSLIMNLRGLTELILFVYYMEQSFVKVPGFSLLIFMTLSLTAISCPLISILYDPTKPYMVNQRRNIQHHPPDKEFRIVLCIFEQDDIHGLTHLLDISNPTENIPFSVSVVRLSELVGRVNPLFIDHEKQQVPPNYQWSSTIHVLERHQELKEPYMKFHFFTAVTPKKTMFRDVCELALEQEASLIILPFNRNVHNHMQSQVLNNAPCSVAIFVDKGLLKTSNTLGSFQRSKYRFAVLFLGGGDSREALVYADKMLARPQVSLTVIRFLTHNFVGYNEIEKKLDDGIVTWFWVKNEANQKVVYREVVVRNGEETIAAIQAMNDGAFDLLIVGRKHGINPILLTGLSDWIETEELGLIGDYVSSADFFGSASVLVVQQQILRG 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10908g00015 799 Pfam Sodium/hydrogen exchanger family 80 461 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium10908g00015 799 Gene3D - 72 475 IPR038770 -
Vium10908g00015 799 PANTHER CATION/H + ANTIPORTER 49 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10908g00015 Vium-Chr10908 123480 126069 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10908g00015 46 796 Antiporter Super Family AT5G37060 38.335 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10908g00015 K26731 - gmx:100783296 1045.8