Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10908g00010 ATGGGGGTGCAAATTGATCCCAAGCAAATCTTCAAGATTGAAAAGCAAGAAATAGTGATCGGTGTAGTTGGTCACGTGTCTTCTTTAGCATGTAGTGGTGTAATTTTAAACATTTTTAGATCAATCTACCCAGAGGAAACTAAAGATCCTAGTGTTCATGTTTTACTGATATCATCTTCTGTGACTACGTTTCCTGTAGTAAGTGCCTTTCTAACAGAGATGAATATTATTAATTCAGAGGTTGGACGCATAGCTGTATCCACTTCTGTGGTTAGTGATTCGTTCATGTGGGTATTTTATTTTGTGGTAATCAAAGGTGCTATAGCGATTCGACTAGAAACATATAAACCTATTACAGAAATAATGGTGTCGGTTTCTTATGTCGCCCTTTTATTCTTCCTTTTAAGGCCATTAGTTATATGGATCTCCAATCGTAATCCACGAGGAAAACCAATGACAGAAACTCATTTTATTTCAATCATTTGTATACTTTTGTTTGTTGGATTGACTGCAAGTATTACAGGACAACCTCCTTTTGTTGTTGCCTTTTGTTTTGGGTTGATCTTACCCGATGGTCCTCCTTTAGGTTCTGTTCTCACAGAAAAGCTTGACACTGTCGGTTCTACTTTGATAGTTCCATCTTATTGTACCATTGTTGCCCTTAAAACCAGTCCTCGTTCATTAGTAGAATTCAAGTCACTCACCATTGAGCTTATCTTACTTGCAATGTATCTAGGGAAGTTTCTGGGCACCATTTTCTCCTCACTTCTTTTTCGGATTGATTTTTGGGATTCATTTGCATTGTCTCTAATCATGTGTTGTAAAGGCCTCATGGATCTCAGCTTCCTCAACTTATTATTGAATATGAAGGCAATAGAAGAACAACCTTTCACCCTTGCTATATTTACCATGGTGGTAGTAACTGGTTGTGCAAGTCTTTGTGTTTATCACATGTATGATCCTTCAAAAAAGTATAGATCATATATTAAAAAGACAATCAGGAATTCTCAGCCAGAACCAGATCTCAAAATACTTGCATGTGTCCATCACGAAGAACATGTATATCCAATCATCAACCTTTTGCAAGCCGCTAACCCTAGAGAGGATACTCCACTCTCAGTCTTTGTCCTTCACCTTGTGGAGCTTTCAGGTAGTGTCATTCCCACTTTCACAGAAGATAATATTGCTAACAAGTCATCTCAACACATACACAACGCCTTTGATCAATTTCACAAGCACAACAACGGTACTGTCAACTTGCATTTCTTCACAGCAAAAACCCCATTTGTCAGCATGCCCTACGATGTCTGCAACCTTGCAATGGAGTTCACGTCTAACATTGTGATCATGCCATTTCATAAATGGTACAGTAAAGATAACATTGAGTACTTGAATGCTTCGATCAGGACACTGAACCAACATGTTCTAAAGAAAGCTCCTTGCTCTGTTGGAATCTTTGTAGATCGGGGTCAGATCAATGACAAAGGATTTGTGTTATATGAGAAGTTGATTTGTGAAGTTGCAATGATGTACTTGGGTGGAGGGGATGACCAAGAGGCATTGTCTTTTAGTTTACGTATAGCTCAGCATCCAAACGTGAGACTCACGGTATTCTGGGTAAGGGTTAAAACGCAAAGCAAACAAAGGAAAACGAAGAACCCTTACATTGACTTGAGGGAGCATATACGTTATTGTAGTTACCTTGAAGGAAAAGTAACATTCAAGGAAGAGGTTGTGGAAGATGGTGCAGATACAACAAAAGCTATTCTAAGAATAGAGAAACTCTTTAGTTTGATCATAGTTGGTAAGCATCATGTGAAAGACTCTCCATGTACATTAGGGTTGACAGAATGGTGTGAACTTCCTGAGCTTGGTCCACTTGGAAACCTCTTAGCCACATCAGATTTTACATGTTCATTTTTTGTGGTACAAGAACTACCAAGGTGGTTCTAG 1953 0.3866 MGVQIDPKQIFKIEKQEIVIGVVGHVSSLACSGVILNIFRSIYPEETKDPSVHVLLISSSVTTFPVVSAFLTEMNIINSEVGRIAVSTSVVSDSFMWVFYFVVIKGAIAIRLETYKPITEIMVSVSYVALLFFLLRPLVIWISNRNPRGKPMTETHFISIICILLFVGLTASITGQPPFVVAFCFGLILPDGPPLGSVLTEKLDTVGSTLIVPSYCTIVALKTSPRSLVEFKSLTIELILLAMYLGKFLGTIFSSLLFRIDFWDSFALSLIMCCKGLMDLSFLNLLLNMKAIEEQPFTLAIFTMVVVTGCASLCVYHMYDPSKKYRSYIKKTIRNSQPEPDLKILACVHHEEHVYPIINLLQAANPREDTPLSVFVLHLVELSGSVIPTFTEDNIANKSSQHIHNAFDQFHKHNNGTVNLHFFTAKTPFVSMPYDVCNLAMEFTSNIVIMPFHKWYSKDNIEYLNASIRTLNQHVLKKAPCSVGIFVDRGQINDKGFVLYEKLICEVAMMYLGGGDDQEALSFSLRIAQHPNVRLTVFWVRVKTQSKQRKTKNPYIDLREHIRYCSYLEGKVTFKEEVVEDGADTTKAILRIEKLFSLIIVGKHHVKDSPCTLGLTEWCELPELGPLGNLLATSDFTCSFFVVQELPRWF 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10908g00010 650 Gene3D - 1 327 IPR038770 -
Vium10908g00010 650 PANTHER CATION/H + ANTIPORTER 1 645 - -
Vium10908g00010 650 Pfam Sodium/hydrogen exchanger family 2 309 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10908g00010 Vium-Chr10908 65640 67682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10908g00010 1 645 Antiporter Super Family AT1G06970 34.894 9.89e-128 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10908g00010 K26731 - gmx:100804488 914.45