LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium10908g00009	ATGGAGGTAGGTCAGGAAAACCTCATTCGCAGTACCTTAAGTGTTGCAACCAATTCGCTTGGAGAGCCTTTCATATGTCATAGCACAGCTAATCAAATCAGCTCCAAGGGAATCTGGTTTGGAGATGACCCACTTTCATATTCTCTCCCCATTTTCTTGCTCCAACTTTTTCTCATGTTCATCTTCACCCATTTCTTTTACATTATTCTCAAGCCTTTTGGTCAACCGGCTGTTGTTTCTCAAATTCTTGGTGGTATGACTTTAGGTCCTTCTATTCTTGGACACAGTGCAACATTTTCTGCGAAGGTTTTCCCATTAAAAGAGAGAAGTGTGCTTGATACAATGACTTTTTTTGGATTTATGTTATTCATCTTCTTAAGTGGGGTAAAGATAGATCCAACCATCACTTTTAGATTAGGTAGAAGGAATTGTGTTATAGGAATTGCAGGCTATTTTGTTCCTTACATTCTTGCCAAAGTGGTTTTCTGTATCCTCAACCATTCCTTTTCATTTGATAGTGATACTTATAGGATGCTCTATGTTGTGATAGAACTTCAATGTATTGCAGCCTTTCCGGTAATCACTCGCTTTCTTTCTGAACTTCAGATCCTCAATTCAGAGATTGGGAGGATGGCCGCTTCTTCTTCATTAGTGGCTGAGGCTTGCTTCATTGTAAACATGACATTAACATTTTTTATTAAGTTGTCTTTAACAAAGTCAATAGTAGTATCTATTGGATCTTTCTTGTCCTCCCTTGTACTTTTTTTGTTCGTCATATATGTAGTTCACCCTGCTGCATTATGGGCAATTCAACAATCACCAGAAGGAAAACCTGTGGAAGAAATTTACATTTGTGCAGTTCTTGTAACACTAATGATTTGTGGACTCCTAGGTGAAATCATTGGCATAAATGCACTCGTTGTGTCTTTCTTTATTGGGCTAGCTATACCTGATGGTCCGCCCTTGGGAGCAGCATTGGTAGACAAGCTTGATTGCTTTGTTTCTGTAGTGTGCATACCTATGCTTTTTATCATAGTTGGATTAAGGACAAATGTCTATGCCATACAGACCAAGAGGAACATACTTGGAATTCAATTAATCATTTGCACTATTTTTTGTGGCAAAGTTTTAGGGGCTTTGTTGCCTCTCCTTTACCTTAGGATGCCAATTCGAGATGCCTTTGCTCTTGGTTTTATAATGAACATCAAAGGCACGGTTGAAATGGCCTTGTTGATTACATTGAAATTGAAAGATGTGGTGAATGATGAATGCTTTACAATTATGGTTCTAAATTTGCTTTTTGTAAGCGGGATTGTGTCCCCTATTGTAAAAAGTCTATATGATCCTTCAAGGAGGTTTCTTGCTTACAAAAGGAGGACACTTATGCATCACAACAATGATGAACAGTTGCGCATACTAGCTTGCATTCATAAACAAGAAAATGTTCTGGGTATTTTAAACCTCCTTTCTGCTTCCAATCCCACTAAAGAAAGCCCTATTGATTTAGTTGTGCTCCAACTTATTAAGCTTGTGGGGCGATCTTCCTCTGTTCTTGTTGCACATGTGCCGTGTAAGAAGTTCGGGGAACTTCCTACTCTAAGTGAACAGATTTTTAACTCATTCGACAAGTTTGAAGATGCATACAAGGGCAAGATCACCATACATAGCTATAAAGGCATTTCTCCCTATGCTACAATGCATAATGATGTGTGCTACTTGGCACTTGAAAAGAGAACAACTTTTATTATATTACCCTTTCATAAGCGATGGATATTTGGAAGGACAACTGAGTCGTCTTTTCCTTTTCAGCAAATTAACAAACATGTTTTAGAGAAGGCTCCTTGCTCAGTTGGTGTCCTTATTGATCGTGGTAATCAGAAGATGTTTTGGTGTGGCCACACAAAGGAATCAACCTATCACGTGGCTGTGTTTTTCTTTGGGGGTGCAGATGATCGAGAAACACTTGCATATGCAAAGCGTATGTTGGATCAACCTTATGTCTACATTACGCTTTTTCATTTTTCATCTTCAACTGACATTGTTGGAGGAACAGAAAGAAGCAAAATGCTTGACACAGAAATCTTAAGTGAATTTAGGCTTAAGGCCTTCCGAAATGAGAGAGTTTCTTTCAAAGATGAGATGATAACGACTGGAAGAGATTTACTTTCAGTTGTTGAATACATGGAGAGTTATTATGACCTTGTCCTGGTTGGGAGGAAGCATGGTGATTCAAAAGTAATGTCAGAACTTAACAAATGGAAGAATGGGGAATTGGGAGTTGTTGGAGAGATTCTTGTCTCTTTAAATGTTGGAGCCCAAACATCTATTTTAGTGGTGCAACAACAAACCAGATATTGGGGATCACGTAATCCAGAGGACTCTATAAGAAAAGTATAA	2397	0.3851	MEVGQENLIRSTLSVATNSLGEPFICHSTANQISSKGIWFGDDPLSYSLPIFLLQLFLMFIFTHFFYIILKPFGQPAVVSQILGGMTLGPSILGHSATFSAKVFPLKERSVLDTMTFFGFMLFIFLSGVKIDPTITFRLGRRNCVIGIAGYFVPYILAKVVFCILNHSFSFDSDTYRMLYVVIELQCIAAFPVITRFLSELQILNSEIGRMAASSSLVAEACFIVNMTLTFFIKLSLTKSIVVSIGSFLSSLVLFLFVIYVVHPAALWAIQQSPEGKPVEEIYICAVLVTLMICGLLGEIIGINALVVSFFIGLAIPDGPPLGAALVDKLDCFVSVVCIPMLFIIVGLRTNVYAIQTKRNILGIQLIICTIFCGKVLGALLPLLYLRMPIRDAFALGFIMNIKGTVEMALLITLKLKDVVNDECFTIMVLNLLFVSGIVSPIVKSLYDPSRRFLAYKRRTLMHHNNDEQLRILACIHKQENVLGILNLLSASNPTKESPIDLVVLQLIKLVGRSSSVLVAHVPCKKFGELPTLSEQIFNSFDKFEDAYKGKITIHSYKGISPYATMHNDVCYLALEKRTTFIILPFHKRWIFGRTTESSFPFQQINKHVLEKAPCSVGVLIDRGNQKMFWCGHTKESTYHVAVFFFGGADDRETLAYAKRMLDQPYVYITLFHFSSSTDIVGGTERSKMLDTEILSEFRLKAFRNERVSFKDEMITTGRDLLSVVEYMESYYDLVLVGRKHGDSKVMSELNKWKNGELGVVGEILVSLNVGAQTSILVVQQQTRYWGSRNPEDSIRKV	798

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium10908g00009	798	Gene3D	-	51	453	IPR038770	-
	Vium10908g00009	798	Pfam	Sodium/hydrogen exchanger family	58	443	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Vium10908g00009	798	PANTHER	CATION/H + ANTIPORTER	29	784	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium10908g00009	Vium-Chr10908	58684	62136	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium10908g00009	25	793	Antiporter Super Family	AT2G13620	37.563	1.19e-173	519