Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10908g00001 CTAAAGGAGGGTTACACAAGCAATTCTACCTATATATACATATTGATACGTGTACTTATATCCTCACATCTCAGTTTTTTATCCGCTAAATTCCTGGAAAACATGAAGACACCCCTTGTCCTTGATATGAAGGATGTTGTAATAGTTAAACCCTGCAAGCCCACACCATCTGAACTTCTTCCTCTGTCCACCATTGACAGTGATCCTGTTCTCAACATTCTGTGTCAGACCATTTATGTTTACAAAGCAAATCTTGATTCCCCAAATGGCCAACTTGATCCTGCTCAGGTGATAAAAGAAGCTCTCTCAAAGGTTTTGGTTTACTATTATCCTCTTGCTGGGAAGATAGTAACATTTGATGATGGAAAACTTGGAATCAACTGCAATGCTGATGGAGTTCCATTTTTGGAGGCAACTGCTAACTGTGAACTCTCTTCTCTTCATTATCTAGAAGGGATCGATGTTCCAACTGCACAGAAATTGGTCATTAATAATGATAACCCTTCTGAAGGTGAAAACCACGCCCTGGCTTTCATGGTGACCAAGTTTCTCTGTGGGGGTTTCACTCTTGGCATGGGGTTGTCACACAGTGTTTGTGATGGGTTTGGTGCATCTCAATTCTTCAGAGCCTTGGCTGAACTTGCATGTGGAAAAAGTGAGCCCTCGGTGAAACCTGTGTGGGAGAGGGAGAGACTAATGGGGACACTTCTTAAGGAACAACTCCAATTTCCCATTGATGAGACTTCAAGGGCAGTTTCACCATTTTGGCCAACCAATGAGATTTCACATGAATGCTTTAACTTCAACGCCAAGAGCATACAAAGACTCAAAATGGAACTGATGAAGGAAAGTGTTGATGTGAAGGAAAGCTTCACAACTGTTGAAACACTTGGTGCCTATGTTTGGAGGTCAAGGGCTAGAGCTTTGGAATTGAACTCTGATGGGAAAACTATGTTGTGTTTAGCTGTAGGGGTGAGACGTCTGTTGAATCCACCCTTGCCTGAAGGGTATTATGGGAATGCTTTTGTGGGTTCATATGTGGTGCAAACAGTGAAAGAACTTGATGAAAGACCACTCTCAGAGATTGTGAAGCTCATCAAAGAGAACAAAAAGCTTCCTTCCAATAATGAGTATATCAGAAACACAATAAACATGTTAGAGACAATTAGACAGACAAACGTAAGGGTTGAAGGAACATGTGCATCTGTGGTGTTAACAGATTGGAGACAGCTGAGTTTGTTGGAAGAAGTGAACTTTGGATGGAAGGCTTCAGTGAATATAATACCAGTTCCGTGGAATATGTTAGGGTATGTGGACTTATGCCTTTTCTTGCCTCCTAGTAACTTGGATCCTTCAATGAAAGCAGGAGTTAGGGTCTTTGTTTCCCTGCCCAAAGCTTCCATGCCCAAGTTTAGGGAAGAGATGGAGTCACTGAAGCTTACGAGAGCTGATGATAATAGCATCTAG 1467 0.4199 LKEGYTSNSTYIYILIRVLISSHLSFLSAKFLENMKTPLVLDMKDVVIVKPCKPTPSELLPLSTIDSDPVLNILCQTIYVYKANLDSPNGQLDPAQVIKEALSKVLVYYYPLAGKIVTFDDGKLGINCNADGVPFLEATANCELSSLHYLEGIDVPTAQKLVINNDNPSEGENHALAFMVTKFLCGGFTLGMGLSHSVCDGFGASQFFRALAELACGKSEPSVKPVWERERLMGTLLKEQLQFPIDETSRAVSPFWPTNEISHECFNFNAKSIQRLKMELMKESVDVKESFTTVETLGAYVWRSRARALELNSDGKTMLCLAVGVRRLLNPPLPEGYYGNAFVGSYVVQTVKELDERPLSEIVKLIKENKKLPSNNEYIRNTINMLETIRQTNVRVEGTCASVVLTDWRQLSLLEEVNFGWKASVNIIPVPWNMLGYVDLCLFLPPSNLDPSMKAGVRVFVSLPKASMPKFREEMESLKLTRADDNSI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10908g00001 488 Gene3D - 40 243 IPR023213 -
Vium10908g00001 488 Gene3D - 257 475 IPR023213 -
Vium10908g00001 488 Pfam Transferase family 47 477 - -
Vium10908g00001 488 PANTHER ACYL TRANSFERASE 4 41 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10908g00001 Vium-Chr10908 719 2322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10908g00001 41 438 Monolignol Biosynthesis Gene Families AT5G48930 27.924 3.74e-35 134