Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium10900g00001 ATGGAAAATAACGTCATTGAGAATTCTAGCAGTGTTCCTCATAAAGAGGAGAACATCAACACTGGCGAAACTACTCAGTTGCCGGTTCCGGAATCTGAAGACAAACCCGACACTAAATCCGATGCCAAACCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCTGAATCCGATGCGAAACCCGCCACCGAACCCGATGATGCCAAACCCGACGTGGAACCCGACGGCGAAACTGAAAAGGCCACAGATTCGGAAGGAGTTACTGAAAAGGAAGAATCCAAAGAAGAGGAGGAAAAAGAAAAGAAAGAAGAAACTGTCGAGGCTGAACCGGAATCTCCGGTTCCGAGTCTCGAGAAGGTTTTAGATGAGATTGACCAATTTCTCGTGACATTACAACAAAAAGTCCATGCCAAAGAATCAACACCATTGGAAATCCCTAATTTCATCCCCGTTTTCTTGCATCTGGTGGAACAGAAGATAGTGAAGTACGACACGGGTGAAATGAAATGGGGAGAAACAATTGAAGACGATTCCTCGCTTTTGGGATGCGCGAATCGCATTTCAAGGCTGATGAACCATTTCATAGAGTACTCGCGATCTCATGCAGAGAAAGAACAAGAGGACGAGGAGAAGGTGACGGTCCGAATAGACTTCATGATCAACGGCGTCAGCGTGATTCAGCAGCGTGTGATGTCGTTTTTGGAGGACGAGTTCCGTACACTGATGGAAGAATCTAGAAACCCAAATAAACCAGACTCAAAGGGAAAACAACAGGTGGCAGACTCCTTAGAGTCGGAGCCACTCGAAGAAAGTATTCCCGAATTCCCAGGTTTCGCGGAGGAAGCCATTGCGAATCTGAACAGAGTCGCCAAGGAAATGGTAGCCAGCGGTTACGAGAACGAGTGTTGCCAAGTCTACGCACTTTCGCGGAGGCATGCGTTTGAGGACGGCATGAACAAAATTCTTGGGTACGAGAAGCTCAGCATAGACGAGATTCAGAGAATGCAGTGGGAGACACTGGAGCGCGAAATCCCCACATGGATCAACACCTGGAAGGAGTGCACCTCTGTATGGTTCCCGGGAGAGCGAAAGCTAGTGGAAATGGTGTTCGGCAAGGAAGCTGACACCGTGGTGAGCCTCATGGGCAACATTTCCCGCTCAATTGTCATTCAGCTGCTTAATTTCGGGGAGAGCGTTGCCATGACAAAGCGCGCCGGCGAAAAACTCTTCAAACTCTTGGACATGTACGAGACTCTACGAGACGCCATTCCAATAATGGAGACCTTGTTCCCGGATGACATAATGGGGGAAATCAAGACCGAAACGACATCCGCAAAATGTCGTCTCGGAGAGGCAGCAGTGTTAATATTCTGCGACCTGGAGAATTCGATTAAATCGGAGACTGGAAGAACTCCGGTGGCGGGAGGCGCGGTTCATCCTCTGACACGTTATATCATGAACTACCTAAGGTTAGCGTGTGAGTATAAAGATACATTGGAGGAAGTGTTCAAAGAGCATTCGAAAATCGAGCGTGCGGATTCAACTAGCAGGCCTCGCTACGAAACCGAGGAGAGCAAACCGAAGAACGAGAACAAACACAAAGAGGATGAGTCGCCGTTTGCAGCACAATTAATGCGGGTGATGGAACTTCTGGACTCGAATCTGGAGGGGAAGGCGAAGCTGTACAAGGAGGTTGCGTTGAGCTGCATTTTCATGATGAACAATGGAAGGTACATAGTGCAGAAGATAAAAGGTTCTGCGGAGATCTACCAAGTGATGGGAGAAACGTGGTGTCGTAAGAGATCGACGGAGCTGAGGACTTACCACAAGAACTACCAGGTGGAGACGTGGAGCAAGATTCTGAGCTACCTGAGCCCTAAAGGATTAAGCGATCACGGGAAGGTGCAGAAGCCGGTCCTGAAGGAGCGCTTCAAGGCGTTCAACGCAGCATTTGAGGAGATTCACAAGACGCAGAGCATGTGGGTGGTGAGCGATGAACAGCTTCAATCGGAACTTAGGGTTTCCATCTCTGCACTTGTTATTCCTGCGTACAGATCCTTCTTGGGGAGGTTTTCGCAGTATTTGGACCCGGGCAGACAAACCGAGAAGTATGTAAAGTACCAAGCTGAGGATATAGAGACTTACATTGACGATTTGTTCGACGGGAACGCGCACGGGCGTCGCTAG 2190 0.4922 MENNVIENSSSVPHKEENINTGETTQLPVPESEDKPDTKSDAKPEAEAEAEAEAEAESDAKPATEPDDAKPDVEPDGETEKATDSEGVTEKEESKEEEEKEKKEETVEAEPESPVPSLEKVLDEIDQFLVTLQQKVHAKESTPLEIPNFIPVFLHLVEQKIVKYDTGEMKWGETIEDDSSLLGCANRISRLMNHFIEYSRSHAEKEQEDEEKVTVRIDFMINGVSVIQQRVMSFLEDEFRTLMEESRNPNKPDSKGKQQVADSLESEPLEESIPEFPGFAEEAIANLNRVAKEMVASGYENECCQVYALSRRHAFEDGMNKILGYEKLSIDEIQRMQWETLEREIPTWINTWKECTSVWFPGERKLVEMVFGKEADTVVSLMGNISRSIVIQLLNFGESVAMTKRAGEKLFKLLDMYETLRDAIPIMETLFPDDIMGEIKTETTSAKCRLGEAAVLIFCDLENSIKSETGRTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKIERADSTSRPRYETEESKPKNENKHKEDESPFAAQLMRVMELLDSNLEGKAKLYKEVALSCIFMMNNGRYIVQKIKGSAEIYQVMGETWCRKRSTELRTYHKNYQVETWSKILSYLSPKGLSDHGKVQKPVLKERFKAFNAAFEEIHKTQSMWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYVKYQAEDIETYIDDLFDGNAHGRR 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium10900g00001 729 MobiDBLite consensus disorder prediction 1 117 - -
Vium10900g00001 729 SUPERFAMILY Cullin repeat-like 175 722 IPR016159 -
Vium10900g00001 729 Pfam Exo70 exocyst complex subunit 348 719 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium10900g00001 729 MobiDBLite consensus disorder prediction 509 539 - -
Vium10900g00001 729 FunFam Exocyst subunit Exo70 family protein 165 729 - -
Vium10900g00001 729 Coils Coil 88 108 - -
Vium10900g00001 729 PANTHER EXOCYST COMPLEX PROTEIN EXO70 133 723 IPR004140 GO:0000145|GO:0006887
Vium10900g00001 729 MobiDBLite consensus disorder prediction 30 110 - -
Vium10900g00001 729 MobiDBLite consensus disorder prediction 1 28 - -
Vium10900g00001 729 Gene3D Exocyst complex component Exo70 164 729 - -
Vium10900g00001 729 MobiDBLite consensus disorder prediction 244 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium10900g00001 Vium-Chr10900 25765 27976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium10900g00001 39 725 EXO70 exocyst subunit family AT5G13990 47.917 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium10900g00001 K07195 - gmx:100819960 942.184